{"id":"W2774863689","doi":"10.1093/gbe/evx254","title":"Genomic Loss and Silencing on the Y Chromosomes of Rumex","year":2017,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Tel Aviv University","keywords":"Biology; Gene silencing; Genetics; Epigenetics; Loss of heterozygosity; Gene; Chromosome; X-inactivation; Transcriptome; Gene expression; X chromosome; Allele","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000130373,0.0001460623,0.0001511656,0.0003449196,0.0001237697,0.0002027003,0.0001134141,0.0001752397,0.000600559],"category_scores_gemma":[0.0002150185,0.00008146897,0.0001436088,0.0001213808,0.0002200142,0.0001677009,0.0001991205,0.0001864007,0.0001221005],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001080208,"about_ca_system_score_gemma":0.00006118918,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004595943,"about_ca_topic_score_gemma":0.0005604305,"domain_scores_codex":[0.9999176,0.00001223468,0.000006521773,0.00003592922,0.00001549026,0.00001215824],"domain_scores_gemma":[0.9998193,0.00003420392,0.00009156518,0.00002009104,0.00001198323,0.00002281482],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001213783,0.00000655036,0.01114699,0.00002029655,0.00001017129,0.0002466703,0.000103032,0.0000498907,0.9857751,0.0000469037,0.000006415272,0.002466583],"study_design_scores_gemma":[0.00001353878,0.0003749058,0.7423501,0.00001110325,0.00003310768,0.004273922,0.00027234,0.0006611939,0.2505359,0.0000901465,0.001373448,0.00001028906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991691,0.000138453,0.000404494,0.000006601997,7.79451e-7,0.000002504125,0.00007434759,0.000007654114,0.0001960489],"genre_scores_gemma":[0.9989813,0.00006915847,0.0003742007,0.000008767076,0.000001044666,0.000003011143,0.0001627324,0.000004659717,0.0003950227],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000600559,"threshold_uncertainty_score":0.002009034,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01308043040108283,"score_gpt":0.257711723948122,"score_spread":0.2446312935470391,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}