{"id":"W2780288442","doi":"10.1093/femsec/fix179","title":"Shift of hindgut microbiota and microbial short chain fatty acids profiles in dairy calves from birth to pre-weaning","year":2017,"lang":"en","type":"article","venue":"FEMS Microbiology Ecology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Alberta Livestock and Meat Agency","keywords":"Hindgut; Biology; Lachnospiraceae; Faecalibacterium prausnitzii; Firmicutes; Bacteroidetes; Ruminococcus; Microbiology; Bifidobacterium; Proteobacteria; Gut flora; Lactobacillus; Food science; Bacteria; Fermentation; Feces; Biochemistry; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004307724,0.0004192121,0.0007613979,0.0001733288,0.0003143241,0.00004066851,0.0007822424,0.0009227691,0.0000658949],"category_scores_gemma":[0.0001704259,0.0004225478,0.0001222485,0.00006721449,0.0007073133,0.00001295847,0.000962407,0.0003615668,0.0000238135],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005648082,"about_ca_system_score_gemma":0.0002399174,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007270847,"about_ca_topic_score_gemma":0.007397563,"domain_scores_codex":[0.997172,0.0002276353,0.0006772589,0.001064723,0.00003063219,0.0008277643],"domain_scores_gemma":[0.9984808,0.00005723226,0.0003015504,0.0009193177,0.00007511987,0.0001660067],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002764824,0.0001056814,0.2790427,0.00003601702,0.00007047052,0.000010089,0.0003847439,0.000004098062,0.7184407,0.00003126887,0.001224064,0.0003737726],"study_design_scores_gemma":[0.001081565,0.0005374444,0.6945339,0.00004938466,0.00002036704,0.0000639948,0.00007950982,0.0000021235,0.2927645,0.00003336396,0.01046531,0.0003684622],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959876,0.0006538099,0.00008162807,0.0008464025,0.0007070237,0.0007644476,0.0008272084,0.00001836028,0.0001135307],"genre_scores_gemma":[0.995574,0.0002372093,0.00210845,0.0007962216,0.0002659726,0.00004135603,0.0006815609,0.00004912898,0.0002460983],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4256761,"threshold_uncertainty_score":0.9998226,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01055286117518399,"score_gpt":0.2637861222100281,"score_spread":0.2532332610348441,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}