{"id":"W2780737922","doi":"10.1038/s41596-021-00588-0","title":"Generic acquisition protocol for quantitative MRI of the spinal cord","year":2021,"lang":"en","type":"article","venue":"Nature Protocols","topic":"Advanced Neuroimaging Techniques and Applications","field":"Medicine","cited_by":150,"is_retracted":false,"has_abstract":true,"ca_institutions":"Philips (Canada); McGill University; Centre Hospitalier Universitaire de Sherbrooke; International Collaboration On Repair Discoveries; University of British Columbia; Université de Montréal; Université de Sherbrooke; Centre Hospitalier Universitaire Sainte-Justine; Polytechnique Montréal; Montreal Neurological Institute and Hospital; Mila - Quebec Artificial Intelligence Institute","funders":"National Institute of Neurological Disorders and Stroke; Staatssekretariat für Bildung, Forschung und Innovation; Economic and Social Research Council; Engineering and Physical Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research; CRIS Cancer Foundation; Regione Puglia; University College London Hospitals NHS Foundation Trust; Ministero dell’Istruzione, dell’Università e della Ricerca; Ministero della Salute; Concordia University; Agentura Pro Zdravotnický Výzkum České Republiky; National Institutes of Health; Rosetrees Trust; European Commission; Multiple Sclerosis Society; Bundesministerium für Bildung und Forschung; National Imaging Facility; National Institute for Health and Care Research; University of Pennsylvania; SpinalCure Australia; University of Minnesota; National Science Foundation; Compute Canada; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Polytechnique Montréal; Wellcome Trust; Institut de Valorisation des Données; AstraZeneca; National Center for Advancing Translational Sciences; Craig H. Neilsen Foundation; McGill University; Canada First Research Excellence Fund; Max-Planck-Gesellschaft","keywords":"Protocol (science); Magnetic resonance imaging; Computer science; Diffusion MRI; Medicine; Spinal cord; Neuroimaging; Medical physics; Nuclear medicine; Radiology; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01179797,0.001393356,0.001270276,0.002006999,0.001394598,0.001723159,0.002115332,0.002102849,0.0720446],"category_scores_gemma":[0.01683935,0.001247597,0.0009904592,0.001694612,0.001063427,0.001471899,0.00169053,0.003512198,0.03064498],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008521078,"about_ca_system_score_gemma":0.003727681,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001136684,"about_ca_topic_score_gemma":0.00175246,"domain_scores_codex":[0.9955125,0.001736354,0.001101529,0.0006070685,0.0008603105,0.0001821796],"domain_scores_gemma":[0.9886763,0.002593343,0.0005247432,0.003131651,0.004783783,0.000290207],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.007472332,0.00144153,0.004898076,0.004814063,0.0002985574,0.002331425,0.001567758,0.004777383,0.121667,0.0208338,0.4274267,0.4024715],"study_design_scores_gemma":[0.001892042,0.002741575,0.01819907,0.002191189,0.0003013664,0.004987631,0.0003492023,0.01030097,0.04474543,0.01603172,0.8978357,0.0004240654],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.01561503,0.002017019,0.8238974,0.002400948,0.002038159,0.07890834,0.02831375,0.01459581,0.03221365],"genre_scores_gemma":[0.03309346,0.002018698,0.7285882,0.003799842,0.0006520532,0.1759051,0.03030852,0.005433691,0.02020036],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.0720446,"threshold_uncertainty_score":0.2410132,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.148618969952191,"score_gpt":0.51340233755156,"score_spread":0.364783367599369,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}