{"id":"W2781645346","doi":"10.1186/s13039-017-0348-y","title":"Distinct subtypes of genomic PTEN deletion size influence the landscape of aneuploidy and outcome in prostate cancer","year":2018,"lang":"en","type":"article","venue":"Molecular Cytogenetics","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"PTEN; Biology; Aneuploidy; Prostate cancer; Cancer research; Transcriptome; Genome instability; Comparative genomic hybridization; Cancer; Copy number analysis; Genetics; Gene; Copy-number variation; PI3K/AKT/mTOR pathway; Genome; Gene expression; Signal transduction","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001769197,0.0001393541,0.0002163585,0.0008241785,0.0001581532,0.0003366829,0.000128394,0.0001497346,0.0007335169],"category_scores_gemma":[0.0006657918,0.0001013972,0.0001883323,0.0004787623,0.0001961265,0.0001158575,0.0002347376,0.0001951852,0.0001305558],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001820978,"about_ca_system_score_gemma":0.0001531877,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001734291,"about_ca_topic_score_gemma":0.002940804,"domain_scores_codex":[0.9998648,0.00002619161,0.000008658113,0.00004343162,0.00003687984,0.0000199857],"domain_scores_gemma":[0.9996333,0.000115667,0.000125567,0.0000296557,0.0000351288,0.00006059439],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009051182,0.00004718399,0.8286501,0.00004489431,0.0002048061,0.0002278643,0.0001933453,0.002336388,0.15186,0.0001100387,0.0001448239,0.0152755],"study_design_scores_gemma":[0.000003587639,0.00006727731,0.9940555,0.000002085497,0.00004482965,0.0003608127,0.00007044822,0.001480678,0.003641189,0.000109553,0.0001575757,0.000006477871],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992846,0.0001465994,0.0002330445,0.000007751972,6.726405e-7,0.000003150353,0.0001116072,0.00001125714,0.0002012774],"genre_scores_gemma":[0.9996004,0.00004761402,0.00008629049,0.000004713271,0.000001024697,0.000002408488,0.0001717254,0.000004504083,0.00008133701],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001734291,"threshold_uncertainty_score":0.003448427,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01716860800973375,"score_gpt":0.3086190504851919,"score_spread":0.2914504424754582,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}