{"id":"W2781646070","doi":"10.1534/g3.117.300334","title":"Multiple Origin but Single Domestication Led to <i>Oryza sativa</i>","year":2018,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"York University; Zegar Family Foundation; New York University Abu Dhabi; National Science Foundation","keywords":"Domestication; Oryza sativa; Introgression; Biology; Oryza; Phylogenetic tree; Evolutionary biology; Allele; Oryza rufipogon; Genetics; Botany; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007479863,0.0003130119,0.0004021832,0.0006782542,0.000380699,0.0005123509,0.0002957509,0.0002309993,0.001623422],"category_scores_gemma":[0.000800156,0.0001672167,0.0006937793,0.000949897,0.0003736887,0.0003823041,0.0005531542,0.0008269878,0.0003980787],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003562448,"about_ca_system_score_gemma":0.0002584037,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008768686,"about_ca_topic_score_gemma":0.001796784,"domain_scores_codex":[0.9995073,0.0000828739,0.00006841405,0.0002040739,0.00006122801,0.00007610872],"domain_scores_gemma":[0.9989113,0.000327273,0.0002901669,0.0002987341,0.00008564566,0.00008695201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004993733,0.00005389365,0.1005411,0.0002156877,0.0003438272,0.0009066099,0.000371015,0.000675084,0.8801831,0.0006225598,0.0005256131,0.01506211],"study_design_scores_gemma":[0.00004031502,0.000286763,0.7614308,0.00004804102,0.0006103989,0.002469101,0.0006070623,0.004227879,0.2152006,0.001085017,0.01393813,0.00005586062],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934815,0.0001272189,0.003306547,0.00007696609,0.00001210657,0.00001264376,0.002153934,0.0001383521,0.0006907755],"genre_scores_gemma":[0.9931925,0.00008657888,0.002425902,0.00009771995,0.00000709522,0.00001345378,0.003712462,0.0000962948,0.0003679387],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001623422,"threshold_uncertainty_score":0.005430877,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02353830051714188,"score_gpt":0.2514797978344193,"score_spread":0.2279414973172774,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}