{"id":"W2781719734","doi":"10.1016/j.ygeno.2018.01.001","title":"Investigation of putative invasion determinants of Actinobacillus species using comparative genomics","year":2018,"lang":"en","type":"article","venue":"Genomics","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Microbiology; Actinobacillus; Virulence; Pathogen; Comparative genomics; Genome; Commensalism; Human pathogen; Gene; Genomics; Virology; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002085736,0.0003137684,0.0002635286,0.0004741692,0.0002730338,0.0003923233,0.0002867376,0.0002634753,0.0005873442],"category_scores_gemma":[0.0002033958,0.000108002,0.0002603942,0.000359049,0.0002736147,0.0003265497,0.0002108384,0.0006576471,0.0001393714],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003323406,"about_ca_system_score_gemma":0.000316167,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00122644,"about_ca_topic_score_gemma":0.00122262,"domain_scores_codex":[0.9999148,0.00001411219,0.000004009809,0.00001804969,0.00002268928,0.00002634759],"domain_scores_gemma":[0.9998553,0.00004053395,0.0000325609,0.000009204944,0.00002687924,0.00003553315],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008389185,0.00003318194,0.0007479606,0.00002350339,0.00000343361,0.00003587262,0.00003364212,0.0000583635,0.9976115,0.0001913948,0.0000103478,0.001166995],"study_design_scores_gemma":[0.00003285078,0.001170885,0.1419941,0.00003543665,0.0001040677,0.001019448,0.001001366,0.004328036,0.8445961,0.001022244,0.00467259,0.0000228697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953499,0.0005571483,0.002632331,0.00008157112,0.00000819949,0.00001930057,0.0002149023,0.00002017552,0.001116399],"genre_scores_gemma":[0.9935337,0.0003513619,0.004612383,0.00004936707,0.000008331464,0.0000156815,0.000800507,0.000008684297,0.0006199727],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00122644,"threshold_uncertainty_score":0.002438545,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.133489231743003,"score_gpt":0.3324990787324186,"score_spread":0.1990098469894157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}