{"id":"W2783228553","doi":"10.1093/ve/vex041","title":"The global origins of resistance-associated variants in the non-structural proteins 5A and 5B of the hepatitis C virus","year":2017,"lang":"en","type":"article","venue":"Virus Evolution","topic":"Hepatitis C virus research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; AIDS Vancouver","funders":"","keywords":"NS5A; NS5B; Phylogenetic tree; Hepatitis C virus; Biology; Genetics; Virology; Phylogenetics; Clade; Viral evolution; Hepacivirus; Virus; Mutation; Genome; Evolutionary biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005321555,0.0002675642,0.0003518709,0.001349765,0.0003670088,0.000710256,0.0001985873,0.000318059,0.00117659],"category_scores_gemma":[0.00131276,0.0002115378,0.000364523,0.001515992,0.0004494007,0.0006263353,0.0005219344,0.0005671435,0.0003058789],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000223033,"about_ca_system_score_gemma":0.0001639058,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001893949,"about_ca_topic_score_gemma":0.003008618,"domain_scores_codex":[0.9995214,0.0001216618,0.00004386234,0.0001867684,0.00005404481,0.00007223826],"domain_scores_gemma":[0.9987831,0.0002823368,0.0005773297,0.0001557375,0.000124694,0.00007692687],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003997936,0.000040852,0.9447064,0.00009466596,0.0002248944,0.0003866438,0.0006885063,0.001034537,0.03143194,0.0005262918,0.0002077358,0.02025759],"study_design_scores_gemma":[0.000005958247,0.00005938752,0.9949345,0.00002328347,0.00008124724,0.0006194723,0.0004018557,0.001065267,0.001109281,0.0002689632,0.001419774,0.00001095891],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9957932,0.001513714,0.001037001,0.00004235645,0.000005196869,0.000007849666,0.0005396041,0.00001033487,0.001050717],"genre_scores_gemma":[0.9982641,0.0004096902,0.0005140516,0.00002391565,0.000008029722,0.000004237698,0.0006863808,0.00000822163,0.00008151945],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001893949,"threshold_uncertainty_score":0.003936112,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01865560064072938,"score_gpt":0.3125418776566173,"score_spread":0.293886277015888,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}