{"id":"W2784318130","doi":"10.1371/journal.pone.0191096","title":"Thyroid transcriptome analysis reveals different adaptive responses to cold environmental conditions between two chicken breeds","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Animal Nutrition and Physiology","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"China Agricultural University; University of Ottawa","keywords":"Transcriptome; Biology; Breed; Thyroid; RNA-Seq; De novo transcriptome assembly; Animal science; Genetics; Gene; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001385222,0.0001665033,0.0002571915,0.0003655514,0.0002307526,0.0003098197,0.0001012899,0.0002482114,0.0006626936],"category_scores_gemma":[0.0001838168,0.0001974337,0.0003681268,0.0002085148,0.000231892,0.0001811771,0.0002927671,0.0002648591,0.0001446344],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000230808,"about_ca_system_score_gemma":0.0001405388,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003076671,"about_ca_topic_score_gemma":0.005971654,"domain_scores_codex":[0.9998353,0.00001271165,0.00001024352,0.00008732884,0.00002468627,0.00002974923],"domain_scores_gemma":[0.9998938,0.00001708963,0.0000281891,0.00001010632,0.00002968553,0.00002122697],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003269845,0.00001114684,0.02805801,0.00007058778,0.00004316253,0.00008612027,0.0003282827,0.00009672684,0.9680982,0.00005501,0.00011539,0.002710344],"study_design_scores_gemma":[0.00001433833,0.0002303508,0.9549092,0.00002337799,0.0001398709,0.0003447286,0.0006955909,0.001307734,0.03997313,0.00008025343,0.002257621,0.00002376875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997409,0.0004109741,0.001001184,0.00003194739,0.000008664303,0.000005795636,0.0006931766,0.00001724906,0.0004219973],"genre_scores_gemma":[0.9942942,0.0002271789,0.001602232,0.0001116294,0.000005568882,0.0000287923,0.001973878,0.00004142621,0.001714951],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003076671,"threshold_uncertainty_score":0.006117523,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.063597042738454,"score_gpt":0.2480291281891611,"score_spread":0.1844320854507071,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}