{"id":"W2787614078","doi":"10.1038/s41467-018-04295-5","title":"Changes in genome organization of parasite-specific gene families during the Plasmodium transmission stages","year":2018,"lang":"en","type":"article","venue":"Nature Communications","topic":"Malaria Research and Control","field":"Medicine","cited_by":137,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; University of Texas Health Science Center at San Antonio; University of California, Riverside; National Institute of Food and Agriculture; Adolph C. and Mary Sprague Miller Institute for Basic Research in Science, University of California Berkeley; National Institutes of Health; Wellcome Trust; Agence Nationale de la Recherche; University of Oxford; Bloomberg Family Foundation; Gordon and Betty Moore Foundation; Natural Sciences and Engineering Research Council of Canada; Alfred P. Sloan Foundation; Johns Hopkins University; Bill and Melinda Gates Foundation","keywords":"Biology; Subtelomere; Gene; Genome; Heterochromatin; Genetics; Gene family; Plasmodium falciparum; Gene expression; Regulation of gene expression; Genomic organization; Malaria; Chromosome; Immunology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003048583,0.00004022161,0.00006416247,0.0002464976,0.0001060787,0.0001456155,0.0000516907,0.00008252486,0.000686521],"category_scores_gemma":[0.00009983345,0.00007825074,0.0000609975,0.0002030239,0.0001108607,0.00009883705,0.00007769235,0.000129708,0.0001426814],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001186872,"about_ca_system_score_gemma":0.00007586076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007749663,"about_ca_topic_score_gemma":0.0009432858,"domain_scores_codex":[0.9999704,0.000004030233,0.000001064477,0.000009905088,0.000007210704,0.000007366244],"domain_scores_gemma":[0.9999415,0.00001019328,0.00002630973,0.000004062372,0.000006838723,0.00001109594],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00010153,0.000005575084,0.006610593,0.00002193631,0.000006230213,0.00006305405,0.0000903267,0.0001303352,0.9885997,0.0001436912,0.00006443746,0.004162584],"study_design_scores_gemma":[0.00000645903,0.00008323665,0.7749297,0.000006229712,0.00002259311,0.0008523738,0.0001457414,0.001436432,0.2189157,0.0002961653,0.003295277,0.00001002601],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972362,0.0004469099,0.001331876,0.00002981304,0.000001468478,0.0000028255,0.0003390749,0.00002831795,0.0005835813],"genre_scores_gemma":[0.9975757,0.0002517216,0.001058789,0.00001817592,0.000002280259,0.000007155531,0.000497684,0.000008905439,0.0005795944],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007749663,"threshold_uncertainty_score":0.002296686,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01882546532092904,"score_gpt":0.2932741971843931,"score_spread":0.2744487318634641,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}