{"id":"W2790321093","doi":"10.3389/fmicb.2018.00256","title":"Prevalence and Genetic Basis of Antimicrobial Resistance in Non-aureus Staphylococci Isolated from Canadian Dairy Herds","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":69,"is_retracted":false,"has_abstract":true,"ca_institutions":"Alberta Health Services; University of Saskatchewan; Alberta Health; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates; Agriculture and Agri-Food Canada; Novalait; Université de Montréal; Alberta Innovates - Technology Futures; Public Health Agency; Dairy Farmers of Ontario; Dairy Farmers of Manitoba; Alberta Livestock and Meat Agency; Dairy Farmers of Nova Scotia; Public Health Agency of Canada; Dairy Farmers of Canada","keywords":"Staphylococcus aureus; Antimicrobial; Antibiotic resistance; Biology; Microbiology; Mastitis; Veterinary medicine; Antibiotics; Bacteria; Genetics; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002170128,0.0003455481,0.0008616294,0.0007462154,0.00006762504,0.00001362827,0.0003439487,0.0005075969,0.0001073984],"category_scores_gemma":[0.0001321005,0.0003674006,0.00008638689,0.0006647713,0.001180048,0.00007311554,0.00009416259,0.0004253519,0.00001560232],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003874064,"about_ca_system_score_gemma":0.0005059063,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.01814956,"about_ca_topic_score_gemma":0.1750712,"domain_scores_codex":[0.9973891,0.0001633595,0.0007733915,0.000795803,0.00007069045,0.0008076375],"domain_scores_gemma":[0.9987556,0.00006704242,0.000215067,0.0005861124,0.000172948,0.000203256],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008784377,0.00006872725,0.5759825,0.0001967577,0.00006044499,0.0001504274,0.0005828616,0.000001581674,0.4035917,0.000004230789,0.0181099,0.0003723688],"study_design_scores_gemma":[0.003764844,0.0003451376,0.9308128,0.001381644,0.00009987103,0.00003588549,0.0001950929,0.0001076668,0.05673614,0.0001893444,0.005748108,0.0005834499],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930539,0.002850806,0.0009220206,0.0003829606,0.0007568281,0.0007971508,0.000528755,0.00001946993,0.0006880842],"genre_scores_gemma":[0.9666392,0.0006912592,0.03153848,0.0005119437,0.0001143295,0.00001130264,0.00006529384,0.00004557385,0.0003826022],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3548303,"threshold_uncertainty_score":0.9998778,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005398720969155144,"score_gpt":0.2259800846646394,"score_spread":0.2205813636954843,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}