{"id":"W2790881065","doi":"10.1016/j.virusres.2018.03.001","title":"Apple hammerhead viroid-like RNA is a bona fide viroid: Autonomous replication and structural features support its inclusion as a new member in the genus Pelamoviroid","year":2018,"lang":"en","type":"article","venue":"Virus Research","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":47,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"Ministerio de Economía y Competitividad; Canadian Food Inspection Agency","keywords":"Viroid; Biology; RNA; Hammerhead ribozyme; Ribozyme; Virology; Genetics; Ligase ribozyme; Plant virus; Gene; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002217172,0.0003122831,0.0002799269,0.000398289,0.000431234,0.0006317954,0.0002342676,0.0005075543,0.001249838],"category_scores_gemma":[0.0002749691,0.0001645771,0.0002753159,0.0002597289,0.0004961175,0.0005433611,0.0004166838,0.0005282671,0.0004207735],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003305647,"about_ca_system_score_gemma":0.0002376305,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003492281,"about_ca_topic_score_gemma":0.0005705547,"domain_scores_codex":[0.9998654,0.00001720502,0.000009062007,0.00004600702,0.00004117072,0.00002120605],"domain_scores_gemma":[0.9997898,0.00005591702,0.00003838114,0.00002871064,0.00002149097,0.00006574211],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009507977,0.000008004103,0.0005219171,0.00002856904,0.000004693063,0.0001088137,0.00003658301,0.00003782189,0.9959394,0.0004392339,0.0000235632,0.002756243],"study_design_scores_gemma":[0.00002137838,0.0008057787,0.0243796,0.00001683516,0.00006180898,0.001986932,0.0002236637,0.001704848,0.9586229,0.001192897,0.01095038,0.00003295282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898992,0.001509844,0.00567121,0.00009141232,0.00004872539,0.00002722975,0.0001580256,0.0001530937,0.002441264],"genre_scores_gemma":[0.9904615,0.0003184838,0.006261401,0.00004473198,0.00002072424,0.00001193833,0.0005997519,0.00002908068,0.002252267],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001249838,"threshold_uncertainty_score":0.004181147,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08108603339592187,"score_gpt":0.368190098764192,"score_spread":0.2871040653682702,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}