{"id":"W2791005062","doi":"10.1016/j.mimet.2018.03.013","title":"Transfer of plasmid into the pentose-fermenting yeast Pachysolen tannophilus","year":2018,"lang":"en","type":"article","venue":"Journal of Microbiological Methods","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; BioFuelNet Canada; U.S. Department of Agriculture","keywords":"Pentose; Yeast; Plasmid; Transformation (genetics); Xylose; Auxotrophy; Biochemistry; Fermentation; Escherichia coli; Saccharomyces cerevisiae; Biology; Chemistry; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001571263,0.0003968988,0.0002059128,0.0003130716,0.0001820688,0.0003716155,0.000278203,0.0004555768,0.001354676],"category_scores_gemma":[0.0003673119,0.0002062267,0.0003329901,0.0002670033,0.0002977486,0.0003495004,0.000465615,0.0008507465,0.0004676553],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003147967,"about_ca_system_score_gemma":0.0003487588,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001514499,"about_ca_topic_score_gemma":0.001024496,"domain_scores_codex":[0.9998804,0.00002272878,0.000008042432,0.00002255022,0.00002887465,0.00003741664],"domain_scores_gemma":[0.9997867,0.00009842637,0.00003682305,0.00003425686,0.00001615101,0.00002766248],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001803826,0.00009911205,0.0003230505,0.00005314332,0.00001265776,0.0001113641,0.00009818379,0.000276738,0.9942742,0.0006077212,0.00005448286,0.003908895],"study_design_scores_gemma":[0.00005598496,0.000494602,0.002685799,0.0000144639,0.00004877063,0.0001715286,0.00009762069,0.001817016,0.9924458,0.0001626717,0.001992604,0.00001330546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9892178,0.0002800113,0.008454007,0.000184299,0.00004729951,0.00004928898,0.000211753,0.0001348485,0.001420745],"genre_scores_gemma":[0.9916348,0.0001988315,0.003109645,0.00002582259,0.000007290976,0.0000149762,0.0005789714,0.0000473274,0.00438234],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001514499,"threshold_uncertainty_score":0.004531801,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02318175731703286,"score_gpt":0.2946094265703058,"score_spread":0.2714276692532729,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}