{"id":"W2791346574","doi":"10.1093/gbe/evy034","title":"The DNA Methylation Landscape of Stickleback Reveals Patterns of Sex Chromosome Evolution and Effects of Environmental Salinity","year":2018,"lang":"en","type":"article","venue":"Genome Biology and Evolution","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Stickleback; DNA methylation; Epigenetics; Gasterosteus; Evolutionary biology; Dosage compensation; Context (archaeology); Genetics; Genome; Chromosome; Gene; Fishery","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005757139,0.00009475365,0.0001364502,0.0003477759,0.0001452965,0.0001857803,0.00008108647,0.0001841656,0.0006556979],"category_scores_gemma":[0.0001275554,0.0001046359,0.0001145144,0.0002014633,0.0001606221,0.0001018924,0.0001778686,0.0001910351,0.0001169081],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001698308,"about_ca_system_score_gemma":0.00009624263,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004754656,"about_ca_topic_score_gemma":0.008652567,"domain_scores_codex":[0.9999609,0.000003221838,0.00000248645,0.00001757651,0.000007721848,0.00000806593],"domain_scores_gemma":[0.9999208,0.000009591446,0.00003166335,0.000006297625,0.00001277752,0.00001880143],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001981236,0.00000819525,0.06154656,0.00002556669,0.00003267292,0.00003542011,0.0002145842,0.0001070197,0.9335351,0.00005789578,0.00003381655,0.004205146],"study_design_scores_gemma":[0.000002223541,0.00007229964,0.9809085,0.000003044268,0.00001683537,0.00007591808,0.0001247654,0.0003616889,0.0181087,0.00006357723,0.0002574198,0.000005096342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992062,0.0001974688,0.0002204086,0.00001169358,0.000001458284,0.00000152119,0.000160389,0.000006498303,0.0001943788],"genre_scores_gemma":[0.9989161,0.0001037711,0.0002571411,0.00001971339,0.000001182507,0.000003776285,0.0002483599,0.000003704622,0.0004461453],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004754656,"threshold_uncertainty_score":0.009453952,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005166263829043121,"score_gpt":0.2291302797431008,"score_spread":0.2239640159140577,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}