{"id":"W2791479233","doi":"10.14745/ccdr.v42i04a03","title":"Outbreak of Shigella sonnei in Montréal’s ultra-Orthodox Jewish community, 2015","year":2016,"lang":"en","type":"article","venue":"Canada Communicable Disease Report","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Shigellosis; Pulsed-field gel electrophoresis; Shigella sonnei; Outbreak; Transmission (telecommunications); Ampicillin; Medicine; Judaism; Shigella; Geography; Microbiology; Virology; Biology; Antibiotics; Salmonella; Telecommunications; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004156461,0.0003990232,0.0001711369,0.0006471882,0.002905262,0.0007004174,0.000614817,0.0004760909,0.00115899],"category_scores_gemma":[0.0006278827,0.0002426758,0.0001778372,0.0007707745,0.0006931904,0.0002489912,0.0007880391,0.0005463265,0.00006675783],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.009662611,"about_ca_system_score_gemma":0.01211324,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9244316,"about_ca_topic_score_gemma":0.9682832,"domain_scores_codex":[0.9996837,0.00003614356,0.00001422102,0.00003622223,0.0001082128,0.0001215628],"domain_scores_gemma":[0.9995498,0.00002063392,0.00006105097,0.00001037305,0.0001652729,0.0001928565],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003472114,0.0002348409,0.9453405,0.0001517042,0.0000862851,0.01140031,0.008839758,0.0003093701,0.007998361,0.0003683617,0.005812473,0.01911082],"study_design_scores_gemma":[0.00002561395,0.0001903637,0.986536,0.00004072298,0.00001745466,0.001597255,0.006780892,0.0003349,0.0005901443,0.00003547572,0.00383084,0.00002032801],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966375,0.0003789781,0.0000887749,0.0004854935,0.0000192176,0.00009366898,0.000395417,0.00001342342,0.001887509],"genre_scores_gemma":[0.9976174,0.000449671,0.0002940163,0.0002638593,0.00002235789,0.00001128548,0.0003977473,0.000002416416,0.0009411357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07556838,"threshold_uncertainty_score":0.1520268,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01691243998493679,"score_gpt":0.27232098598899,"score_spread":0.2554085460040532,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}