{"id":"W2791746780","doi":"10.1017/s0950268818000389","title":"The changing HIV-1 genetic characteristics and transmitted drug resistance among recently infected population in Yunnan, China","year":2018,"lang":"en","type":"article","venue":"Epidemiology and Infection","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute of Infection and Immunity","funders":"Centers for Disease Control and Prevention; National Natural Science Foundation of China","keywords":"Genotype; Virology; Population; Human immunodeficiency virus (HIV); Biology; Drug resistance; Genetics; Demography; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001068015,0.0001333811,0.0002487406,0.0001441934,0.0006203477,0.000009445518,0.00003868691,0.0001882082,0.00004445893],"category_scores_gemma":[0.0006918524,0.00009542049,0.0000279251,0.0001797587,0.0004687675,0.00008249605,0.00002962562,0.0002771324,0.00005899525],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004029615,"about_ca_system_score_gemma":0.00001148555,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005620801,"about_ca_topic_score_gemma":0.002631498,"domain_scores_codex":[0.9979586,0.001001698,0.0003332643,0.0002660757,0.00001532396,0.0004250454],"domain_scores_gemma":[0.9991363,0.0005398043,0.0001224603,0.0001348042,0.00003502867,0.00003164477],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001537679,0.00002918616,0.9811303,0.00001316865,0.00004529246,0.000001651909,0.0004559854,4.885325e-7,0.0004862803,0.0003936186,0.0005544561,0.01673579],"study_design_scores_gemma":[0.0006588709,0.0001015645,0.9901407,0.00004061186,0.00001687082,0.00001791706,0.00001449061,0.00006601024,0.0001845278,0.0009604831,0.007707755,0.00009017801],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956326,0.001951178,0.0005127988,0.001037357,0.0003172403,0.000270312,0.00001108248,0.00004074457,0.0002266163],"genre_scores_gemma":[0.9955259,0.003043541,0.0000524107,0.00007279203,0.00006197248,0.00004523203,0.0001721577,0.000008164538,0.001017811],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01664561,"threshold_uncertainty_score":0.4771276,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01239370384033356,"score_gpt":0.2691681863676131,"score_spread":0.2567744825272796,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}