{"id":"W2792434828","doi":"","title":"Minimization of Escherichia coli genome using a bidirectional deletion system","year":2004,"lang":"en","type":"article","venue":"Genome","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"","keywords":"Biology; Escherichia coli; Genome; Genetics; Escherichia coli Proteins; Computational biology; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002206484,0.0006211723,0.0005857144,0.0003165573,0.0003806175,0.0004306632,0.0005304183,0.0002796031,0.001460023],"category_scores_gemma":[0.0002846267,0.0002518688,0.0004475112,0.000316637,0.0001920886,0.0002398757,0.0005667426,0.0007294915,0.0005662712],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003531801,"about_ca_system_score_gemma":0.0004971658,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008876357,"about_ca_topic_score_gemma":0.001411866,"domain_scores_codex":[0.9997659,0.00003943611,0.00001867629,0.00005198324,0.00008615085,0.0000377496],"domain_scores_gemma":[0.999855,0.00003877651,0.000025466,0.00003219361,0.00003038435,0.00001803819],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001553704,0.00004938557,0.0002309609,0.0001071943,0.00001190073,0.00005136384,0.00002160331,0.004304513,0.9827145,0.002819249,0.0002383151,0.009295727],"study_design_scores_gemma":[0.0000216612,0.0001538203,0.000496635,0.000007355682,0.00003746269,0.0001780172,0.0000312937,0.02275778,0.9703509,0.0006076903,0.005343514,0.00001383693],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5643541,0.0007183602,0.4267972,0.0003381261,0.00009385707,0.0001371883,0.0008331285,0.001439352,0.005288756],"genre_scores_gemma":[0.7847905,0.000941757,0.2015215,0.00009326498,0.00001915257,0.0002234673,0.002229452,0.0004567732,0.009724047],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001460023,"threshold_uncertainty_score":0.004884243,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009850532530428523,"score_gpt":0.2118596696169749,"score_spread":0.2020091370865464,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}