{"id":"W2792453656","doi":"10.1007/s00792-017-0988-1","title":"Description of a cryptic thermophilic (pro)phage, CBP1 from Caldibacillus debilis strain GB1","year":2018,"lang":"en","type":"article","venue":"Extremophiles","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba","funders":"University of Manitoba; Genome Canada","keywords":"Biology; Siphoviridae; Genetics; Gene; Lysogenic cycle; Genome; Bacteriophage; ORFS; Open reading frame; Peptide sequence; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001428035,0.0006218348,0.0004552295,0.0007035707,0.0003626749,0.0008410164,0.0006281934,0.0006099755,0.0008121093],"category_scores_gemma":[0.0005860637,0.000210651,0.0003554386,0.0007693387,0.0002974705,0.0004081849,0.0004825592,0.0008006163,0.0005309621],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003230232,"about_ca_system_score_gemma":0.000683292,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002631112,"about_ca_topic_score_gemma":0.001208802,"domain_scores_codex":[0.9998392,0.00001704462,0.000019738,0.0000388821,0.00005158474,0.00003341799],"domain_scores_gemma":[0.999629,0.00007237273,0.00007347352,0.00005443685,0.00006990963,0.0001007227],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002442221,0.0000733205,0.001725813,0.0001523614,0.000006893492,0.0004916029,0.0001287283,0.0001623214,0.9909213,0.0001742577,0.0001402117,0.005779024],"study_design_scores_gemma":[0.00005642051,0.001054904,0.07733264,0.0001030409,0.0001294148,0.005934425,0.001249994,0.002094697,0.8953757,0.0004801317,0.01611226,0.00007630703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901237,0.0009608323,0.003709781,0.0002833424,0.00006896492,0.0001018639,0.002890393,0.0000978913,0.001763313],"genre_scores_gemma":[0.9716029,0.001146047,0.01082962,0.0001159525,0.00004454214,0.0001442538,0.01262031,0.00007507147,0.003421276],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002631112,"threshold_uncertainty_score":0.005231619,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02552837097379654,"score_gpt":0.2398284402372556,"score_spread":0.2143000692634591,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}