{"id":"W2792848668","doi":"10.3201/eid2404.171873","title":"Cooperative Recognition of Internationally Disseminated Ceftriaxone-Resistant <i>Neisseria</i><i>gonorrhoeae</i> Strain","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":238,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de Santé Publique du Québec; Public Health Agency of Canada","funders":"National Health and Medical Research Council; NSW Ministry of Health; Public Health Agency; Australian Government; NSW Health Pathology; University of Queensland; South Eastern Sydney Local Health District; Public Health Agency of Canada; World Health Organization","keywords":"Neisseria gonorrhoeae; Ceftriaxone; Multilocus sequence typing; Biology; Typing; Virology; Men who have sex with men; Phylogenetic tree; Microbiology; Antibiotic resistance; Genetics; Genotype; Gene; Antibiotics; Syphilis","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003038229,0.0002325843,0.0003032427,0.000399464,0.0003734968,0.00003598299,0.0001953776,0.0001215127,0.003316971],"category_scores_gemma":[0.001210975,0.0002211995,0.0001425849,0.0006496536,0.0006253083,0.0002886497,0.00008271433,0.0002537958,0.00063921],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001141087,"about_ca_system_score_gemma":0.0001658917,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002746372,"about_ca_topic_score_gemma":0.0001215451,"domain_scores_codex":[0.9982745,0.0003675131,0.0004567257,0.0004825689,0.00005824478,0.0003604318],"domain_scores_gemma":[0.9980369,0.0002604306,0.0002176281,0.0003567586,0.00107747,0.00005079201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006654504,0.001194972,0.02153397,0.00005594964,0.0006779566,0.000002738523,0.0005126941,0.00004152894,0.9518384,0.0008316985,0.004793956,0.01785072],"study_design_scores_gemma":[0.005172956,0.003869795,0.2404976,0.0003862702,0.0004301775,0.0001917143,0.001185129,0.00005500959,0.6991495,0.00316621,0.04465908,0.001236532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882127,0.0007071383,0.0006288086,0.0001458066,0.001058554,0.0004762238,0.0005959848,0.0002507139,0.007924082],"genre_scores_gemma":[0.9978333,0.00007967283,0.0000243356,0.00004287764,0.0001777991,0.00009774422,0.0006639478,0.00003186777,0.001048426],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2526889,"threshold_uncertainty_score":0.9975941,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0150263903474594,"score_gpt":0.2925871871347885,"score_spread":0.2775607967873291,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}