{"id":"W2793142290","doi":"10.1093/infdis/jiy121","title":"Genetic Diversity of Cryptosporidium hominis in a Bangladeshi Community as Revealed by Whole-Genome Sequencing","year":2018,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institutes of Health; Styrelsen för Internationellt Utvecklingssamarbete; Wellcome Trust; International Centre for Diarrhoeal Disease Research, Bangladesh; National Institute of Allergy and Infectious Diseases; Global Affairs Canada; Bill and Melinda Gates Foundation","keywords":"Cryptosporidium; Genetic diversity; Biology; Diarrhea; Whole genome sequencing; Genome; Genetics; Parasite hosting; Microbiology; Gene; Feces; Medicine; Population; Environmental health; World Wide Web","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000243496,0.0002525558,0.0002517452,0.0009538134,0.0006428895,0.0005620715,0.0002059074,0.0003795348,0.00124994],"category_scores_gemma":[0.0007078015,0.0001854657,0.0001460487,0.001409162,0.0003390908,0.0002260586,0.0004007119,0.0002723072,0.0002894844],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004193274,"about_ca_system_score_gemma":0.0003296397,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01505557,"about_ca_topic_score_gemma":0.01982543,"domain_scores_codex":[0.9997533,0.00004896854,0.00001950117,0.00007343769,0.00004615826,0.0000585727],"domain_scores_gemma":[0.999674,0.00005394214,0.00009463547,0.00002777593,0.00008136743,0.00006826056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002021444,0.00004958994,0.948677,0.00008035284,0.00005775479,0.0006657753,0.00342326,0.0001188172,0.03584921,0.00007323469,0.0001851844,0.01061777],"study_design_scores_gemma":[0.000005810569,0.00009778059,0.9962077,0.00001611402,0.00001819158,0.000539256,0.001973425,0.00009384905,0.0004017792,0.00003819861,0.000599837,0.000008131658],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991217,0.00009610639,0.00006342468,0.00002689925,7.700853e-7,0.00000811363,0.0004683552,0.000001247414,0.0002133877],"genre_scores_gemma":[0.9988648,0.0001972361,0.0001976788,0.00002494883,0.000002406434,0.0000127329,0.0004736442,0.000001288085,0.0002252864],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01505557,"threshold_uncertainty_score":0.0299359,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01190813348445279,"score_gpt":0.2430160178751646,"score_spread":0.2311078843907118,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}