{"id":"W2793440556","doi":"10.1111/jpy.12620","title":"Phylogeny and species delineation in the marine diatom<i>Pseudo‐nitzschia</i>(Bacillariophyta) using<i>cox1</i>,<scp>LSU</scp>, and<scp>ITS</scp>2<scp>rRNA</scp>genes: A perspective in character evolution","year":2018,"lang":"en","type":"article","venue":"Journal of Phycology","topic":"Diatoms and Algae Research","field":"Materials Science","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Fisheries and Oceans Canada","funders":"Kementerian Sains, Teknologi dan Inovasi; Ministry of Higher Education, Malaysia","keywords":"Biology; Phylogenetic tree; Phylogenetics; Clade; Internal transcribed spacer; Evolutionary biology; Diatom; Taxon; Gene; Botany; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000189572,0.0002049369,0.000150922,0.00093286,0.000448642,0.0005187117,0.0002198599,0.0003274204,0.0003892655],"category_scores_gemma":[0.0003081456,0.0001412576,0.000196742,0.0006367539,0.0002548766,0.0002717675,0.0003463588,0.0002485472,0.0001724311],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004023302,"about_ca_system_score_gemma":0.0002513243,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002777736,"about_ca_topic_score_gemma":0.005535062,"domain_scores_codex":[0.9998872,0.00002039259,0.00001081624,0.0000447021,0.00001818968,0.00001861509],"domain_scores_gemma":[0.9998186,0.00004259863,0.00005179461,0.00001290543,0.00003946671,0.00003462451],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005738043,0.00004362799,0.2863927,0.0003117409,0.0001356221,0.0004640749,0.001990801,0.001216893,0.6655731,0.0005987261,0.0001458206,0.04255312],"study_design_scores_gemma":[0.000009399753,0.0001208966,0.9885562,0.0000255121,0.00004864774,0.0004652581,0.0005580534,0.002108933,0.005940048,0.0001606511,0.00199155,0.00001494613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979796,0.0005509518,0.0005431052,0.00002051003,0.000003246322,0.000006800135,0.0001326672,0.000009042681,0.0007541097],"genre_scores_gemma":[0.9974849,0.0002915585,0.001501597,0.0000171097,0.00000313861,0.00001107394,0.000412459,0.000004698836,0.0002734596],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002777736,"threshold_uncertainty_score":0.005523145,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02211449161217365,"score_gpt":0.2828834503088138,"score_spread":0.2607689586966402,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}