{"id":"W2793637911","doi":"10.3389/fgene.2018.00087","title":"STAT6, PBX2, and PBRM1 Emerge as Predicted Regulators of 452 Differentially Expressed Genes Associated With Puberty in Brahman Heifers","year":2018,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Reproductive Physiology in Livestock","field":"Agricultural and Biological Sciences","cited_by":36,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Forskningsrådet om Hälsa, Arbetsliv och Välfärd","keywords":"Biology; Gene; Transcriptome; Brahman; Transcription factor; Gene expression; Wnt signaling pathway; Regulation of gene expression; Genetics; Endocrinology; Internal medicine; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001392326,0.0002420241,0.0003480122,0.0004392771,0.0003006912,0.0003238543,0.00008716522,0.0001791301,0.001857671],"category_scores_gemma":[0.000153394,0.0001564264,0.0003041124,0.0005575956,0.0002185919,0.0001388609,0.0002392442,0.0002871102,0.0003991728],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001749591,"about_ca_system_score_gemma":0.0002484496,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002383922,"about_ca_topic_score_gemma":0.003781955,"domain_scores_codex":[0.9998193,0.00001609466,0.00000787416,0.00006965499,0.00002995104,0.0000571148],"domain_scores_gemma":[0.9998492,0.00004820566,0.00005202015,0.000006233462,0.00001735212,0.00002691989],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008030602,0.0000537727,0.1830453,0.0002663269,0.0001035546,0.0004219557,0.000334872,0.0005969186,0.7974491,0.0002554279,0.0005710577,0.01609863],"study_design_scores_gemma":[0.000009587215,0.0001104561,0.9842264,0.00001766356,0.00006390986,0.0004018526,0.0002175362,0.001260337,0.01107658,0.0001385354,0.002468112,0.000009003916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9921799,0.001654841,0.001462251,0.0000673355,0.00001237468,0.00000856703,0.003570582,0.0000698302,0.0009743366],"genre_scores_gemma":[0.9860952,0.0006920807,0.002349453,0.0001475365,0.00001778311,0.00002608554,0.007527019,0.00004113569,0.003103782],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002383922,"threshold_uncertainty_score":0.006214499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009554807217387367,"score_gpt":0.2032646067969066,"score_spread":0.1937097995795192,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}