{"id":"W2794511584","doi":"10.6026/97320630014048","title":"Hypothetical endogenous SIV-like antigens in Mauritian cynomolgus macaques","year":2018,"lang":"en","type":"article","venue":"Bioinformation","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Simian immunodeficiency virus; Virology; Antigen; Antibody; Biology; Endogeny; Vaccination; Macaque; Immunology; Rhesus macaque; HIV vaccine; Lentivirus; Virus; Vaccine trial; Viral disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007124439,0.0001187514,0.0001611993,0.0005952133,0.00037787,0.000301921,0.0001108282,0.0002773112,0.001071182],"category_scores_gemma":[0.0002607283,0.00006648705,0.0001578492,0.0002930371,0.0002343589,0.0001580721,0.0001755207,0.000192419,0.0001578901],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001830659,"about_ca_system_score_gemma":0.0001080349,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001839429,"about_ca_topic_score_gemma":0.001641607,"domain_scores_codex":[0.999943,0.000006962425,0.000004703691,0.00001830605,0.00001089368,0.0000162359],"domain_scores_gemma":[0.9999022,0.00001579447,0.00003516647,0.000009263042,0.00001398887,0.00002357676],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004089648,0.00007479641,0.0658386,0.0001244569,0.00003232496,0.001474864,0.0006667323,0.00008690829,0.9237394,0.0003559522,0.0001139376,0.00708299],"study_design_scores_gemma":[0.00002723864,0.0008863857,0.9081218,0.00004829754,0.0001113507,0.00904059,0.001507122,0.001627192,0.07070001,0.0008497823,0.007058652,0.00002148687],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991999,0.0003186784,0.00009085219,0.00001563965,0.000002137262,0.00000348191,0.00008028902,0.000004142496,0.0002847563],"genre_scores_gemma":[0.9987969,0.000182644,0.0003447707,0.00003247889,0.000005530488,0.000008343043,0.0003145242,0.000002497738,0.0003122721],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001839429,"threshold_uncertainty_score":0.00365752,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02726858577737255,"score_gpt":0.2556138075882078,"score_spread":0.2283452218108352,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}