{"id":"W2794598870","doi":"10.1186/s13104-018-3308-7","title":"A multi-host approach to identify a transposon mutant of Pseudomonas aeruginosa LESB58 lacking full virulence","year":2018,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Institut universitaire de cardiologie et de pneumologie de Québec, Université Laval; Institute of Infection and Immunity; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Cystic Fibrosis Canada","keywords":"Virulence; Pseudomonas aeruginosa; Mutant; Microbiology; Biology; Transposon mutagenesis; Pathogen; Phenotype; Transposable element; Mutagenesis; Biofilm; Mutation; In vivo; Gene; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002947508,0.0006516385,0.0003664262,0.0006540841,0.0002267701,0.0002645734,0.0005218986,0.0006528246,0.00239776],"category_scores_gemma":[0.0002434607,0.0002312269,0.0004385353,0.0003307447,0.0002258016,0.0001945086,0.0006313057,0.0008812732,0.0006197054],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003406462,"about_ca_system_score_gemma":0.0003115082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001067297,"about_ca_topic_score_gemma":0.001917618,"domain_scores_codex":[0.9996915,0.0000466798,0.00003395904,0.00007006939,0.0001001958,0.00005755155],"domain_scores_gemma":[0.9998028,0.00005582274,0.00004404817,0.00002912573,0.0000202648,0.00004790056],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006477208,0.00009890098,0.0001252773,0.0000197,0.000004570114,0.00004855199,0.00001969515,0.00004224281,0.9984395,0.00007332999,0.00001951054,0.001044077],"study_design_scores_gemma":[0.0001011307,0.00331627,0.007769039,0.00002648103,0.00005700863,0.001375566,0.0001489586,0.003518708,0.9807683,0.0001056794,0.002791194,0.00002159223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9890524,0.0003227372,0.007629269,0.0001570755,0.00005184583,0.0003445021,0.000602301,0.0001196515,0.001720222],"genre_scores_gemma":[0.9673253,0.000487196,0.02128881,0.0001462193,0.00001262071,0.0003211393,0.001328337,0.0001009106,0.008989515],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00239776,"threshold_uncertainty_score":0.008021235,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1227468230224677,"score_gpt":0.3919650717246631,"score_spread":0.2692182487021954,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}