{"id":"W2794992214","doi":"10.1101/270066","title":"Tandem tyrosine residues in the EPEC multicargo chaperone CesT support differential type III effector translocation and early host colonization","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Dalhousie University; Dalhousie Medical Research Foundation","keywords":"Effector; Chaperone (clinical); Tyrosine; Biology; Secretion; Enteropathogenic Escherichia coli; Type three secretion system; Cell biology; Microbiology; Chemistry; Escherichia coli; Genetics; Biochemistry; Mutant; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009977673,0.0001824951,0.0001558379,0.00005682343,0.00007512581,0.000188423,0.0001333128,0.0001723898,0.0005951129],"category_scores_gemma":[0.0001440954,0.00007086773,0.0001805924,0.00006997272,0.0001259387,0.0001143502,0.0002352648,0.0002385415,0.0002474331],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001990857,"about_ca_system_score_gemma":0.0001240829,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004214917,"about_ca_topic_score_gemma":0.0004125371,"domain_scores_codex":[0.9999177,0.00001487077,0.00000990759,0.00001269198,0.00002123209,0.00002352746],"domain_scores_gemma":[0.999893,0.000013325,0.00003700715,0.0000132316,0.00001799933,0.00002557955],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008380182,0.000009856199,0.0002497421,0.000008733141,0.000002144422,0.00002973469,0.000005485058,0.00003258123,0.9992989,0.00002485568,0.00001185077,0.0002422856],"study_design_scores_gemma":[0.00001075924,0.0001769646,0.008096378,0.000003474097,0.000008483446,0.0002140119,0.0000333761,0.00123631,0.9894372,0.00001855516,0.0007601446,0.000004345152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990059,0.0001080137,0.0005904958,0.00001600697,0.000004325818,0.00000511139,0.00007812339,0.00001058629,0.0001816084],"genre_scores_gemma":[0.9987149,0.00005957459,0.0004861131,0.00001246567,0.000001489497,0.000005540111,0.0001973183,0.000007517375,0.0005150856],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005951129,"threshold_uncertainty_score":0.001990855,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0126283947764489,"score_gpt":0.2461526873480361,"score_spread":0.2335242925715872,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}