{"id":"W2795332151","doi":"10.1007/s00122-018-3086-6","title":"Genome-wide association mapping for resistance to leaf rust, stripe rust and tan spot in wheat reveals potential candidate genes","year":2018,"lang":"en","type":"article","venue":"Theoretical and Applied Genetics","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":158,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Food and Agriculture; Hatch; United States Agency for International Development; Consortium of International Agricultural Research Centers; U.S. Department of Agriculture","keywords":"Biology; Candidate gene; Genetics; Genome-wide association study; Plant disease resistance; Population; Quantitative trait locus; Gene; Chromosome; Gene mapping; Association mapping; Genotype; Single-nucleotide polymorphism","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004192528,0.0001628169,0.0002445839,0.00002186904,0.0002193339,0.00007489506,0.0001233039,0.000165417,0.00007822028],"category_scores_gemma":[0.00004275821,0.00008277182,0.00002873947,0.0001874399,0.0002126593,0.00001220458,0.00009587328,0.00008036063,0.000007051603],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002069501,"about_ca_system_score_gemma":0.000007472564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005698325,"about_ca_topic_score_gemma":0.0002085993,"domain_scores_codex":[0.9987695,0.00004588298,0.0002572891,0.0003795935,0.0001285304,0.000419218],"domain_scores_gemma":[0.999495,0.0001582221,0.00005474098,0.00006191766,0.00007173407,0.0001583785],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003204871,0.00004909494,0.009231273,0.00002845796,0.00001275998,0.000002786205,0.0002381476,0.000007992722,0.93226,0.02511759,0.0003341355,0.03239723],"study_design_scores_gemma":[0.001694436,0.001460883,0.6617118,0.00007750547,0.0001096736,0.000008988338,0.0007790746,0.0001851128,0.07676134,0.1605442,0.09540703,0.00125987],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947546,0.0005299768,0.0003110714,0.002688286,0.00007561775,0.0004270553,0.00009658771,0.00001643987,0.001100388],"genre_scores_gemma":[0.9958519,0.0004733869,0.00199456,0.0007079737,0.0005265272,0.00003142533,0.00004103216,0.000002877884,0.0003703577],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8554987,"threshold_uncertainty_score":0.3375337,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009369602091699517,"score_gpt":0.2119335621490049,"score_spread":0.2025639600573054,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}