{"id":"W2795697566","doi":"10.1128/genomea.00207-18","title":"Draft Genome Sequence of the 1,4-Dioxane-Degrading Bacterium Pseudonocardia dioxanivorans BERK-1","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"National Institute of General Medical Sciences","keywords":"Biology; Whole genome sequencing; 1,4-Dioxane; Bacteria; Pyrosequencing; Genome; Genetics; Gene; Chemistry; Organic chemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059167,0.001830197,0.002029213,0.002167053,0.0008765582,0.001372861,0.0008928929,0.001246501,0.004998543],"category_scores_gemma":[0.001997538,0.0007529189,0.001144035,0.003824951,0.0003414006,0.0007187743,0.0007321963,0.00190024,0.004849187],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009169233,"about_ca_system_score_gemma":0.003268743,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01184632,"about_ca_topic_score_gemma":0.008943308,"domain_scores_codex":[0.9995552,0.00004074584,0.0000489678,0.0001564243,0.0001349399,0.00006378911],"domain_scores_gemma":[0.9988137,0.0003037757,0.0002798929,0.00006824308,0.0003581518,0.0001761218],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004433783,0.00042002,0.00652529,0.008399211,0.0003422286,0.001837056,0.001067506,0.003379036,0.8951063,0.0009737667,0.02629033,0.05122548],"study_design_scores_gemma":[0.001745834,0.002748587,0.2900397,0.002356378,0.003823251,0.005310948,0.002119775,0.01373335,0.2149528,0.003759241,0.4586704,0.0007396671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.2174553,0.007136355,0.02509453,0.001432327,0.0007992473,0.0004768256,0.7390085,0.002737311,0.005859543],"genre_scores_gemma":[0.06177666,0.00280687,0.03227668,0.0001346424,0.00008661325,0.0003058236,0.8982903,0.0005303193,0.003792075],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01184632,"threshold_uncertainty_score":0.02355474,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01640769526102853,"score_gpt":0.2242550848646415,"score_spread":0.207847389603613,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}