{"id":"W2795835438","doi":"10.2217/epi-2017-0064","title":"The DNA Methylation Landscape of Enhancers in The Guinea Pig Hippocampus","year":2018,"lang":"en","type":"article","venue":"Epigenomics","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Methylated DNA immunoprecipitation; DNA methylation; Enhancer; Biology; Methylation; Chromatin; Bisulfite sequencing; Molecular biology; Chromatin immunoprecipitation; DNA; Illumina Methylation Assay; Epigenetics of physical exercise; DNA binding site; Bisulfite; Transcription (linguistics); Epigenomics; Genetics; Transcription factor; Promoter; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006278583,0.000143784,0.0001113657,0.0003138728,0.00008457901,0.0001523196,0.0001650621,0.0001799599,0.001204869],"category_scores_gemma":[0.0000892366,0.0001768778,0.0001224017,0.00007607962,0.0002568523,0.0001519074,0.0001728906,0.0002687976,0.0002428206],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000131238,"about_ca_system_score_gemma":0.0001166803,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001273911,"about_ca_topic_score_gemma":0.002136703,"domain_scores_codex":[0.9999723,0.000001754741,0.000001050764,0.00001198454,0.000005993587,0.00000693608],"domain_scores_gemma":[0.9999354,0.00001179398,0.00002168203,0.000006942164,0.00001065575,0.00001359893],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008763625,0.00000481917,0.001640146,0.00002426481,0.000003947237,0.00003401854,0.00002139017,0.00002104239,0.9966086,0.00004662308,0.000009034696,0.001498512],"study_design_scores_gemma":[0.00003190546,0.0005340003,0.3366812,0.00003216469,0.00006623637,0.0008083475,0.0001749991,0.0006323004,0.6583278,0.0003964684,0.002302162,0.00001239018],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950335,0.001216186,0.002026119,0.00004904922,0.000009122074,0.000008271231,0.0002986864,0.00004268608,0.001316417],"genre_scores_gemma":[0.9938604,0.0009157524,0.002142451,0.00005720653,0.000006395049,0.00001676995,0.000527055,0.00001841673,0.002455593],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001273911,"threshold_uncertainty_score":0.004030704,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01010857841022597,"score_gpt":0.2616008151417291,"score_spread":0.2514922367315032,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}