{"id":"W2796010294","doi":"10.1101/296897","title":"Viral Invasion Fitness Across a Continuum from Lysis to Latency","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institute for Advanced Research; Gordon and Betty Moore Foundation; Simons Foundation; National Science Foundation","keywords":"Obligate; Lytic cycle; Virus; Genome; Population; Viral evolution; Viral life cycle; Natural selection; Viral load","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007411527,0.0002692832,0.0004038833,0.0009333969,0.0003507001,0.001974996,0.0004791374,0.0007437411,0.00106086],"category_scores_gemma":[0.00357548,0.0001779782,0.0003233656,0.0004015901,0.001024717,0.001866005,0.001369524,0.0007188788,0.000203986],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009109279,"about_ca_system_score_gemma":0.0002849186,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006305971,"about_ca_topic_score_gemma":0.0003351516,"domain_scores_codex":[0.9995613,0.0001298185,0.00002410077,0.0001241045,0.00008628793,0.00007450469],"domain_scores_gemma":[0.9987614,0.0005792789,0.000296575,0.0001186948,0.0001081213,0.0001359535],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0005149636,0.000331261,0.1064727,0.0003740753,0.0002134482,0.001023251,0.001748239,0.2456851,0.2984111,0.2913032,0.002341141,0.05158147],"study_design_scores_gemma":[0.00004454711,0.0005882527,0.1034597,0.00007780625,0.00007439258,0.00122397,0.001064096,0.6543396,0.02756719,0.2068702,0.004522974,0.0001671713],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9646866,0.0003673889,0.02967115,0.0005120912,0.00001408338,0.00001206693,0.0001219948,0.000105668,0.004509024],"genre_scores_gemma":[0.9973798,0.0001321555,0.001681676,0.0000449306,0.000007296474,0.00001462787,0.0000782506,0.00001736783,0.0006438096],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001974996,"threshold_uncertainty_score":0.006609261,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009355831649263124,"score_gpt":0.2375346035787003,"score_spread":0.2281787719294372,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}