{"id":"W2796201376","doi":"10.3389/fmicb.2018.00640","title":"Human Genetic Susceptibility to Native Valve Staphylococcus aureus Endocarditis in Patients With S. aureus Bacteremia: Genome-Wide Association Study","year":2018,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Infective Endocarditis Diagnosis and Management","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Canadian Institutes of Health Research; Ministère des Affaires Sociales et de la Santé; Assistance Publique - Hôpitaux de Paris; Lundbeckfonden; Erasmus Universiteit Rotterdam","keywords":"Staphylococcus aureus; Bacteremia; Microbiology; Endocarditis; Infective endocarditis; Biology; Staphylococcal infections; Genome; Medicine; Gene; Genetics; Bacteria; Antibiotics; Internal medicine","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000533486,0.0003061161,0.0007711486,0.0005187585,0.00009827829,0.0000204106,0.0001816557,0.0001792959,0.00009860508],"category_scores_gemma":[0.0003338398,0.0002786524,0.000121991,0.0004455999,0.0001324106,0.00006682862,0.0001608566,0.0003666332,0.00003546817],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002277107,"about_ca_system_score_gemma":0.00006444653,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002510227,"about_ca_topic_score_gemma":0.001597019,"domain_scores_codex":[0.9974391,0.0004799086,0.0004983218,0.0007692394,0.0001623905,0.0006509765],"domain_scores_gemma":[0.9988083,0.00008492685,0.0001999485,0.000445224,0.0003613589,0.0001002825],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001371195,0.001142193,0.9785478,0.00001672923,0.0004948581,0.00003639069,0.001303179,0.00002000656,0.0006610042,0.000002420491,0.01717535,0.0004629798],"study_design_scores_gemma":[0.005782382,0.004270077,0.9842794,0.00004312289,0.0001201612,3.975482e-7,0.000610317,5.792776e-7,0.0003620434,0.00004788172,0.004207975,0.0002756625],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941338,0.00006665936,0.0005196409,0.00006898553,0.0009354228,0.003409143,0.00009668763,0.00003585471,0.0007338213],"genre_scores_gemma":[0.9972137,0.00000977484,0.001260991,0.0008373864,0.0001864559,0.0002432981,0.0001639881,0.00003428726,0.00005015291],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01296737,"threshold_uncertainty_score":0.9999666,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005184119241954975,"score_gpt":0.2371073939105592,"score_spread":0.2319232746686042,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}