{"id":"W2797539471","doi":"10.1371/journal.pone.0195880","title":"Quantitative surveillance of shiga toxins 1 and 2, Escherichia coli O178 and O157 in feces of western-Canadian slaughter cattle enumerated by droplet digital PCR with a focus on seasonality and slaughterhouse location","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Shiga toxin; Feces; Biology; Escherichia coli; STX2; Digital polymerase chain reaction; Serotype; Microbiology; Virulence; Cattle Diseases; Pathogen; Livestock; Beef cattle; Polymerase chain reaction; Veterinary medicine; Virology; Animal science; Ecology; Genetics; Gene; Medicine","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000238363,0.0003152622,0.0002345666,0.001064121,0.0008602242,0.0006687588,0.0004261998,0.0002292377,0.0008232099],"category_scores_gemma":[0.0003925957,0.0001745861,0.0001592632,0.001656615,0.0004625937,0.0001136907,0.0002336243,0.0001924544,0.0001630217],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004356331,"about_ca_system_score_gemma":0.003025336,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8741121,"about_ca_topic_score_gemma":0.9497195,"domain_scores_codex":[0.9995527,0.00001434632,0.00001547553,0.00008630546,0.0002420607,0.00008914706],"domain_scores_gemma":[0.9995677,0.00002213799,0.00006512739,0.00001052241,0.0002580889,0.00007633517],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004143428,0.0001174388,0.802291,0.000187133,0.00006240291,0.0002795137,0.001873338,0.0003629734,0.1781194,0.00011028,0.0006138002,0.01556838],"study_design_scores_gemma":[0.000002909402,0.0000837347,0.9940975,0.000007863938,0.0000117681,0.0001040271,0.0006109423,0.0001928772,0.003826637,0.000004605307,0.001051922,0.000005246041],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972993,0.0002041841,0.0002010256,0.00001642684,0.000002440052,0.00002746682,0.001322441,0.00001061084,0.0009162031],"genre_scores_gemma":[0.9925203,0.0004491215,0.00165013,0.00005378487,0.000003301482,0.00002992628,0.002763523,0.000004965219,0.002524971],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1258879,"threshold_uncertainty_score":0.2532586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02134018147715082,"score_gpt":0.2460812703269034,"score_spread":0.2247410888497526,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}