{"id":"W2798020033","doi":"10.1371/journal.ppat.1006962","title":"Viral chimeras decrypt the role of enterovirus capsid proteins in viral tropism, acid sensitivity and optimal growth temperature","year":2018,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics and Genomics of Geneva; Institute of Genetics; Université de Genève; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Capsid; Biology; Tropism; Tissue tropism; Virology; Viral replication; Virus; Infectivity; Cell biology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002435867,0.0001617782,0.0003045541,0.0001508083,0.0001665753,0.00002084117,0.0000668982,0.0001551249,0.00003711161],"category_scores_gemma":[0.0001594225,0.0001084511,0.00007628438,0.0002078781,0.0004906788,0.0001051533,0.0001153876,0.0004873829,0.00002416277],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004039628,"about_ca_system_score_gemma":0.00007804009,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000185406,"about_ca_topic_score_gemma":0.0001333487,"domain_scores_codex":[0.9987649,0.0002329713,0.0002184735,0.0002647791,0.0001876197,0.0003312862],"domain_scores_gemma":[0.999392,0.00003376378,0.00005436397,0.0002910707,0.0001635172,0.00006533725],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002504262,0.0003092999,0.0824193,0.00002104391,0.00008224681,0.00003812573,0.0006992158,2.226653e-7,0.9149687,0.000180145,0.00001144922,0.001019783],"study_design_scores_gemma":[0.001007617,0.001671737,0.173808,0.00006757395,0.00005388163,0.00009785423,0.0003228969,0.0003408555,0.822328,0.00008568786,0.0001075275,0.0001083579],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978154,0.0005539711,0.00001185534,0.0004003733,0.0000456924,0.0006276413,0.00004684031,0.00002795262,0.0004702141],"genre_scores_gemma":[0.9990905,0.00006677294,0.0003804955,0.0001672987,0.0001485178,0.00003549676,0.00001080973,0.00002046654,0.00007966082],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0926407,"threshold_uncertainty_score":0.4422506,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01039065502916319,"score_gpt":0.2514313603268615,"score_spread":0.2410407052976983,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}