{"id":"W2798697958","doi":"10.1101/305060","title":"Persistence of Resident and Transplanted Genotypes of the Undomesticated Yeast, <i>Saccharomyces paradoxus</i> in Forest Soil","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Saccharomyces cerevisiae; Yeast; Persistence (discontinuity); URA3; Botany; Ecology; Horticulture; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002620904,0.0001947255,0.0003629485,0.00004191054,0.00007508758,0.00003210267,0.000373006,0.0001731285,0.0000449607],"category_scores_gemma":[0.0000758913,0.00008563442,0.0001205789,0.0004843937,0.0002740035,0.00004809678,0.0001195764,0.0001731915,0.000002654133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002576259,"about_ca_system_score_gemma":0.0000470062,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004272759,"about_ca_topic_score_gemma":0.000446173,"domain_scores_codex":[0.9986269,0.0001552003,0.0004124656,0.0003809162,0.0002394891,0.0001849678],"domain_scores_gemma":[0.9991496,0.00009463383,0.0003258102,0.0001805878,0.0001815238,0.00006784827],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004774504,0.00005807146,0.08868388,0.0001277564,0.00005558868,0.00000319472,0.00003389219,0.00006647684,0.9108548,0.00005375538,0.00001260678,0.000002212604],"study_design_scores_gemma":[0.0001589522,0.00004537609,0.80179,0.0003076746,0.00009894082,1.498315e-8,0.00002577822,0.0002934579,0.1970561,0.000006056629,0.00005497501,0.0001626487],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988362,0.0003247725,0.000003968536,0.0002632794,0.00009260417,0.0002390916,0.0002100971,0.00002250262,0.0000075386],"genre_scores_gemma":[0.9994519,0.0003529971,0.00007999223,0.00004823353,0.00004481836,0.0000146478,5.807649e-7,0.000002555955,0.000004249388],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7137987,"threshold_uncertainty_score":0.349207,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01859639293423193,"score_gpt":0.1968580367756051,"score_spread":0.1782616438413732,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}