{"id":"W2798706685","doi":"10.1101/313205","title":"A Genome-Wide Association Analysis Reveals a Role for Recombination in the Evolution of Antimicrobial Resistance in <i>Burkholderia multivorans</i>","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; St. Michael's Hospital; University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Biology; Genetics; Antibiotic resistance; Burkholderia cepacia complex; Genome-wide association study; Population; Pseudomonas aeruginosa; Sputum; Drug resistance; Genotype; Burkholderia; Gene; Single-nucleotide polymorphism; Antibiotics; Tuberculosis; Medicine; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008896137,0.0002720101,0.0002901661,0.000739542,0.0004850217,0.0007084237,0.0003650237,0.0005291558,0.001785585],"category_scores_gemma":[0.001351992,0.0001941687,0.0006554005,0.0008565602,0.0003123477,0.0001821914,0.0005008677,0.0006527733,0.0001416771],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001546454,"about_ca_system_score_gemma":0.0001476846,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003557607,"about_ca_topic_score_gemma":0.004034393,"domain_scores_codex":[0.9993423,0.0002085364,0.00004718469,0.0002637182,0.00004758502,0.00009075376],"domain_scores_gemma":[0.9989826,0.0004006843,0.0002975115,0.0001264395,0.00005278273,0.0001400466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006980842,0.00005976611,0.9691049,0.00002439778,0.0006545366,0.0003623511,0.0001333285,0.0004936011,0.02339726,0.0001468635,0.0001697205,0.004755155],"study_design_scores_gemma":[0.00002516373,0.0001039039,0.9952678,0.000007997485,0.0002089537,0.0004748921,0.000125439,0.002334987,0.0009791341,0.0001288779,0.000334056,0.000008777038],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990618,0.0001328594,0.0004690832,0.00003379738,0.000003464652,0.000002817675,0.0001761306,0.000009237981,0.0001107302],"genre_scores_gemma":[0.9995389,0.00002908754,0.0002231652,0.00001807927,0.000003710044,0.000001826969,0.000131586,0.000003681604,0.00005004029],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003557607,"threshold_uncertainty_score":0.00707376,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0108140337358635,"score_gpt":0.2549367181500101,"score_spread":0.2441226844141466,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}