{"id":"W2799457316","doi":"10.1371/journal.pcbi.1006129","title":"Effects of spatiotemporal HSV-2 lesion dynamics and antiviral treatment on the risk of HIV-1 acquisition","year":2018,"lang":"en","type":"article","venue":"PLoS Computational Biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Western Canada Research Grid; Compute Canada","keywords":"HSL and HSV; Lesion; Herpes simplex virus; Immune system; Medicine; Sex organ; Human immunodeficiency virus (HIV); Immunology; Virus; Virology; Internal medicine; Biology; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000502995,0.00008103822,0.0001710919,0.00006904412,0.00006943576,0.000001845392,0.00001749214,0.00005586036,0.00001826409],"category_scores_gemma":[0.00003748832,0.00004743429,0.00004352567,0.00006934942,0.0001980268,0.00001443969,0.00001262256,0.0000368215,0.00001707126],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005142598,"about_ca_system_score_gemma":0.00003055699,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00007044037,"about_ca_topic_score_gemma":0.000009733534,"domain_scores_codex":[0.9994962,0.0001065104,0.0001452782,0.0001212273,0.00006269723,0.0000680702],"domain_scores_gemma":[0.9992585,0.0004417222,0.0001146733,0.00007256382,0.00009275341,0.00001978891],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009926652,0.003451059,0.8336078,0.0001342362,0.001423713,0.00001009175,0.0004748198,0.0001394099,0.00695148,0.03619473,0.0000928422,0.1165272],"study_design_scores_gemma":[0.00340909,0.008070255,0.8548628,0.0001453501,0.0003881198,0.00001155206,0.0000248243,0.0564954,0.0689767,0.007396478,0.0001145772,0.0001048744],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9967777,0.00003539084,0.002084269,0.0002546785,0.00004690876,0.0002953054,0.00008349107,0.00001144667,0.0004108635],"genre_scores_gemma":[0.9986813,0.00003323427,0.0009780976,0.00005308192,0.00005172669,0.00001120042,0.0001612532,0.000005400663,0.00002470735],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1164223,"threshold_uncertainty_score":0.1934314,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01772189305508761,"score_gpt":0.2828581664224403,"score_spread":0.2651362733673527,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}