{"id":"W2800043800","doi":"10.1186/s12859-018-2131-4","title":"On the rank-distance median of 3 permutations","year":2018,"lang":"en","type":"article","venue":"BMC Bioinformatics","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Fundação de Amparo à Pesquisa do Estado de São Paulo; Genome Canada; Alfred P. Sloan Foundation","keywords":"Combinatorics; Permutation (music); Mathematics; Median; Rank (graph theory); Distance matrix; Matrix (chemical analysis); Heuristic; Discrete mathematics; Algorithm; Mathematical optimization","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001555933,0.00007825606,0.0000673176,0.00002741094,0.0000739059,0.00001195277,0.0001877538,0.00005225,0.00007025572],"category_scores_gemma":[0.000131906,0.00005327127,0.00004981539,0.00009041734,0.0001700442,0.000002940407,0.00004097122,0.00003674404,0.000104361],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006288588,"about_ca_system_score_gemma":0.00005004444,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001736623,"about_ca_topic_score_gemma":0.00003132371,"domain_scores_codex":[0.9994584,0.00001676959,0.0001968948,0.00006531526,0.0001367938,0.0001257703],"domain_scores_gemma":[0.9994189,0.00002663478,0.0000967659,0.0003268978,0.00009866928,0.00003218798],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001324804,0.001523335,0.02136556,0.002317949,0.001652047,0.000004710703,0.03790897,0.003119032,0.2466084,0.223671,0.383154,0.07735021],"study_design_scores_gemma":[0.005421352,0.004362661,0.0160832,0.0002478012,0.0002124988,0.00004115915,0.01110502,0.2392536,0.4000313,0.009603036,0.3118621,0.001776278],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.4333993,0.0002119885,0.4963158,0.0008597361,0.0005582187,0.0008909753,0.0001633555,0.00003317704,0.06756745],"genre_scores_gemma":[0.9624507,0.00004022988,0.03599744,0.0004248862,0.0001903313,0.00001888532,0.00008738331,0.0000138449,0.0007762774],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.5290514,"threshold_uncertainty_score":0.2172339,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01553976904207698,"score_gpt":0.2449202251514496,"score_spread":0.2293804561093727,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}