{"id":"W2800524745","doi":"10.3201/eid2406.171648","title":"Genomic Epidemiology of Global Carbapenemase-Producing<i>Enterobacter</i>spp., 2008–2014","year":2018,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":155,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Klebsiella pneumoniae; Enterobacter; Biology; Whole genome sequencing; Molecular epidemiology; Clade; Multilocus sequence typing; DNA sequencing; Microbiology; Genome; Genetics; Genotype; Gene; Phylogenetics; Escherichia coli","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002103525,0.000214286,0.0001478024,0.001137137,0.0001595245,0.0003999286,0.0001731303,0.0002121815,0.0005974786],"category_scores_gemma":[0.000505866,0.0001309276,0.0002211624,0.001244706,0.0002331298,0.0002210228,0.0003608973,0.0001952693,0.0001079328],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006071867,"about_ca_system_score_gemma":0.0005104323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01538521,"about_ca_topic_score_gemma":0.0166132,"domain_scores_codex":[0.9997882,0.00002977417,0.00002034048,0.00008172025,0.00003113065,0.00004876678],"domain_scores_gemma":[0.9996095,0.00002732373,0.0001844863,0.000018631,0.00009638944,0.00006365179],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001202975,0.00002245518,0.9860287,0.00003278967,0.00004221761,0.000117791,0.0002291291,0.0003538271,0.007449354,0.0000512202,0.0002661632,0.005286013],"study_design_scores_gemma":[0.000001812805,0.00005069843,0.9984111,0.00001059974,0.00001289336,0.0001827661,0.0002463213,0.00009449213,0.0003614374,0.000009702105,0.0006164955,0.000001708978],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982438,0.00014607,0.0001090708,0.00003652306,0.000001825058,0.000006130123,0.001068865,0.000005146121,0.0003825655],"genre_scores_gemma":[0.9951983,0.0002997229,0.0004049058,0.00004731496,0.000005245533,0.00001008295,0.003753543,0.000004302161,0.0002766504],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01538521,"threshold_uncertainty_score":0.03059131,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009233062139192219,"score_gpt":0.2739776685888421,"score_spread":0.2647446064496499,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}