{"id":"W2800565788","doi":"10.1101/321927","title":"On the importance of accounting for intraspecific genomic relatedness in multi-species studies","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Ecology and Vegetation Dynamics Studies","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Espace pour la vie","funders":"Harvard University","keywords":"Intraspecific competition; Phylogenetic tree; Biology; Evolutionary biology; Ecology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.1162129,0.001726894,0.002227549,0.002218619,0.001882458,0.003045202,0.002679128,0.001993683,0.001425706],"category_scores_gemma":[0.2234657,0.0009112295,0.002447917,0.002748473,0.002976558,0.007386717,0.003632489,0.004330669,0.0003197433],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007081544,"about_ca_system_score_gemma":0.002017278,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003528201,"about_ca_topic_score_gemma":0.005288441,"domain_scores_codex":[0.915507,0.07637924,0.001727617,0.003421924,0.002466778,0.0004974795],"domain_scores_gemma":[0.5622607,0.3888917,0.01009521,0.03064984,0.005371326,0.002731218],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0019994,0.00111235,0.4498638,0.002315534,0.01653429,0.00252158,0.00473539,0.1603466,0.05050607,0.03494228,0.00477339,0.2703493],"study_design_scores_gemma":[0.00022451,0.002074851,0.3269181,0.000702553,0.002756705,0.0009758616,0.001802634,0.486872,0.01296287,0.1535358,0.0107718,0.0004023146],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.2227371,0.002528598,0.7664817,0.003725408,0.0004369469,0.0002982827,0.0003645978,0.0007556267,0.002671696],"genre_scores_gemma":[0.7970363,0.0004881004,0.2001649,0.0008991103,0.0002155775,0.0003607504,0.0002335225,0.0002695782,0.0003321038],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.1162129,"threshold_uncertainty_score":0.6146001,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03438197818746763,"score_gpt":0.2518627330894028,"score_spread":0.2174807549019352,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}