{"id":"W2800633908","doi":"10.1101/320341","title":"HIV-1 antisense protein of different clades induces autophagy and associates to the autophagy factor p62","year":2018,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Autophagy; ATG5; Immunoprecipitation; Autophagosome; Cell biology; Western blot; Biology; Flow cytometry; Molecular biology; ATG8; Gene; Chemistry; Genetics; Apoptosis","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001065129,0.0002198942,0.0001600155,0.0001297523,0.000137668,0.0002550872,0.0001111192,0.0002421984,0.001024716],"category_scores_gemma":[0.0001033369,0.0001039512,0.0002847654,0.00009834339,0.000158943,0.0001289145,0.000160804,0.0005243204,0.0003222967],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001836807,"about_ca_system_score_gemma":0.00009482108,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002374192,"about_ca_topic_score_gemma":0.000287421,"domain_scores_codex":[0.9999008,0.00001500734,0.0000111333,0.00002821463,0.00002755486,0.00001738843],"domain_scores_gemma":[0.9999114,0.00001997398,0.00002794606,0.00001033631,0.00001114479,0.00001928254],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003144158,0.000007417088,0.00008026997,0.00001276299,0.0000022064,0.00001477477,0.000004670838,0.0000183075,0.9995975,0.00002760891,0.00001537377,0.0001875481],"study_design_scores_gemma":[0.00001132691,0.0002819998,0.004641639,0.000007769959,0.00001683165,0.0003086491,0.00003944563,0.00140101,0.9910091,0.00006961031,0.002207683,0.000004979108],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9954178,0.000811495,0.002519411,0.00008180777,0.00003736684,0.00001921874,0.0002837913,0.00004135332,0.000787685],"genre_scores_gemma":[0.993578,0.0004854113,0.002995606,0.0001407592,0.00001404643,0.00002781063,0.0007456788,0.00002126586,0.001991356],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001024716,"threshold_uncertainty_score":0.003428042,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01639998342845923,"score_gpt":0.2481482423872584,"score_spread":0.2317482589587992,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}