{"id":"W2801668680","doi":"10.1186/s12864-018-4733-7","title":"Valine-glutamine (VQ) motif coding genes are ancient and non-plant-specific with comprehensive expression regulation by various biotic and abiotic stresses","year":2018,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"U.S. Forest Service; National Research Foundation; Concordia University; National Research Foundation Singapore; Joint Genome Institute; U.S. Department of Agriculture; U.S. Department of Energy","keywords":"Biology; Gene; Genetics; Gene family; Biotic stress; Gene duplication; Genome; Gymnosperm; Abiotic stress; Plant evolution; Arabidopsis; Abiotic component; Evolutionary biology; Botany; Ecology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001158296,0.0003132973,0.0002971055,0.0004237167,0.0002425233,0.0002657424,0.0002229097,0.0002352814,0.0007709158],"category_scores_gemma":[0.0002222262,0.0001151067,0.0002931668,0.0004788809,0.0002460324,0.00022882,0.0001992397,0.0002331154,0.0002556347],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002396885,"about_ca_system_score_gemma":0.0002073826,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005306013,"about_ca_topic_score_gemma":0.0009604224,"domain_scores_codex":[0.9998835,0.000008933808,0.000008040791,0.00005708383,0.00002440899,0.00001799262],"domain_scores_gemma":[0.9997041,0.00005457297,0.0001346261,0.00001872346,0.00004618356,0.00004172197],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001579283,0.00001684115,0.03133552,0.0002477443,0.00004300276,0.0005219379,0.0001395699,0.0003896446,0.9554457,0.0003113883,0.0001224718,0.01126812],"study_design_scores_gemma":[0.00003361976,0.000571668,0.6887094,0.0001258066,0.0002083201,0.00742577,0.000524407,0.003968836,0.2712587,0.00142113,0.0256865,0.00006593801],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895653,0.003146696,0.005107058,0.00004010623,0.00001725548,0.00001522969,0.001171649,0.000084003,0.0008527961],"genre_scores_gemma":[0.9920168,0.0007779624,0.004293561,0.00003428468,0.00001059785,0.00001500658,0.002005449,0.00002513968,0.0008211802],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007709158,"threshold_uncertainty_score":0.002579033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01362211047017603,"score_gpt":0.2182350610703576,"score_spread":0.2046129506001816,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}