{"id":"W2802072196","doi":"10.1292/jvms.18-0049","title":"Investigation of genetic diversity and epidemiological characteristics of &lt;i&gt;Pasteurella multocida&lt;/i&gt; isolates from poultry in southwest China by population structure, multi-locus sequence typing and virulence-associated gene profile analysis","year":2018,"lang":"en","type":"article","venue":"Journal of Veterinary Medical Science","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Fundamental Research Funds for the Central Universities; University of Toronto","keywords":"Pasteurella multocida; Multilocus sequence typing; Biology; Genotype; Microbiology; Population; Typing; Molecular epidemiology; Genotyping; Genetic diversity; Genetics; Veterinary medicine; Gene; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001200001,0.00010825,0.0004145446,0.0002512363,0.0002989252,0.00001108125,0.0002378065,0.0002030163,0.0001605033],"category_scores_gemma":[0.001470305,0.000082189,0.00005640359,0.0005893583,0.001629426,0.0002023241,0.0003578045,0.0002374521,8.190432e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000586067,"about_ca_system_score_gemma":0.00009934362,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005574886,"about_ca_topic_score_gemma":0.00006875462,"domain_scores_codex":[0.9984387,0.0003821398,0.0005875846,0.0002294084,0.000145285,0.0002168813],"domain_scores_gemma":[0.99882,0.0002077001,0.0005352165,0.00009660808,0.0002122901,0.0001281803],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007203244,0.00003692629,0.4085763,0.000009445061,0.00004280196,0.000004502414,0.0002344749,0.000002881644,0.5902169,0.000004008164,0.000004583362,0.0007951804],"study_design_scores_gemma":[0.000536317,0.0005672037,0.9926788,0.0001056166,0.00007600526,0.00005818043,0.00002970554,0.001291925,0.00446401,0.000107477,0.000004813038,0.00007991904],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980517,0.0008054562,0.0007467354,0.00004131549,0.0001165074,0.00009021101,0.0001426109,0.000003916971,0.000001544591],"genre_scores_gemma":[0.9989104,0.0003471517,0.000662411,0.00002204658,0.00001978687,5.780685e-7,0.00003135277,0.000002674498,0.000003624683],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5857529,"threshold_uncertainty_score":0.6003688,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04701743065253997,"score_gpt":0.3084259727068484,"score_spread":0.2614085420543084,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}