{"id":"W2802335003","doi":"10.1128/genomea.00277-18","title":"Complete Genome Sequence of Shewanella sp. WE21, a Rare Isolate with Multiple Novel Large Genomic Islands","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Leibniz-Gemeinschaft; Concordia University; Innovationsfonden","keywords":"Biology; Whole genome sequencing; Genome; Shewanella; Gene; Bacteria; Genetics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000221751,0.0008965253,0.0006528253,0.001303656,0.0006705051,0.0007692534,0.0004333844,0.0008305055,0.002037412],"category_scores_gemma":[0.0008389778,0.0002406105,0.0006554561,0.00214149,0.0002891471,0.0005185778,0.000746258,0.000960324,0.001924574],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004507437,"about_ca_system_score_gemma":0.001159199,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005940864,"about_ca_topic_score_gemma":0.00431786,"domain_scores_codex":[0.9997848,0.00001947386,0.00002527938,0.00004820003,0.00007793417,0.0000444164],"domain_scores_gemma":[0.9993494,0.0001154839,0.0001085466,0.00009153243,0.0002050631,0.0001300201],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008349133,0.0000961683,0.004759217,0.000625598,0.00007132351,0.0007552711,0.0003142334,0.000528961,0.973643,0.0002446916,0.001423102,0.01670357],"study_design_scores_gemma":[0.0003235037,0.0008557331,0.4401643,0.0003309191,0.0008427804,0.005372597,0.001727903,0.003663922,0.3687856,0.001506823,0.1761591,0.0002668406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8497682,0.004489833,0.009530828,0.0007367586,0.0002646912,0.0002427341,0.1297819,0.0005677735,0.004617277],"genre_scores_gemma":[0.5945801,0.004426726,0.01499874,0.0002719019,0.0001286255,0.0002899707,0.3757714,0.0002306367,0.009301861],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005940864,"threshold_uncertainty_score":0.01181257,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02424838405604791,"score_gpt":0.2408787966368193,"score_spread":0.2166304125807714,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}