{"id":"W2802676735","doi":"10.1261/rna.064493.117","title":"Simultaneous sequencing of coding and noncoding RNA reveals a human transcriptome dominated by a small number of highly expressed noncoding genes","year":2018,"lang":"en","type":"article","venue":"RNA","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":101,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of General Medical Sciences; Faculty of Medicine and Health, University of Sydney; Canadian Institutes of Health Research; Génome Québec; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Université de Sherbrooke; Fonds de Recherche du Québec - Santé; University of Texas at Austin; Welch Foundation","keywords":"Biology; RNA; Transcriptome; Genetics; Intron; Non-coding RNA; RNA splicing; Small nucleolar RNA; Computational biology; Gene; RNA editing; Small nuclear RNA; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001079856,0.0001434347,0.0002181389,0.0003491554,0.000128294,0.0002284873,0.00006853218,0.0001680237,0.0005388904],"category_scores_gemma":[0.0002094747,0.00009844275,0.0001543257,0.0003098102,0.0001185908,0.0000658394,0.0001006676,0.0001539091,0.0003107242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008608033,"about_ca_system_score_gemma":0.0001323849,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003811858,"about_ca_topic_score_gemma":0.0007768232,"domain_scores_codex":[0.9998763,0.00001523813,0.000007696038,0.0000491565,0.00003431277,0.00001726352],"domain_scores_gemma":[0.9998794,0.00004719268,0.00002181251,0.00001537015,0.00002154519,0.00001462078],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00008172022,0.000004837579,0.002071142,0.0000254407,0.000007144189,0.00006597651,0.000036561,0.00005000313,0.9935128,0.00003347005,0.0000394075,0.004071547],"study_design_scores_gemma":[0.00001880097,0.0004932178,0.2325228,0.00003201886,0.0001224523,0.002394792,0.000259384,0.005047093,0.7498791,0.0003213281,0.008891176,0.00001794376],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9836141,0.001553332,0.01184335,0.00006054174,0.00001149079,0.00002008028,0.001626669,0.0001373902,0.001132993],"genre_scores_gemma":[0.9705381,0.001124099,0.02000475,0.0001293762,0.00002554354,0.00005153111,0.006254511,0.00006376705,0.001808213],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005388904,"threshold_uncertainty_score":0.001802742,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01752025054595384,"score_gpt":0.2913446004169657,"score_spread":0.2738243498710118,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}