{"id":"W2802802304","doi":"10.1089/aid.2017.0135","title":"Prevalence of Rilpivirine and Etravirine Resistance Mutations in HIV-1 Subtype C-Infected Patients Failing Nevirapine or Efavirenz-Based Combination Antiretroviral Therapy in Botswana","year":2018,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Fogarty International Center; Alliance for Accelerating Excellence in Science in Africa; National Institutes of Health; African Academy of Sciences; New Partnership for Africa's Development; Wellcome Trust","keywords":"Rilpivirine; Etravirine; Nevirapine; Efavirenz; Virology; Medicine; Drug resistance; Reverse-transcriptase inhibitor; Resistance mutation; Internal medicine; Reverse transcriptase; Viral load; Human immunodeficiency virus (HIV); Antiretroviral therapy; Biology; Polymerase chain reaction; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007095108,0.0001916994,0.0003649349,0.001040187,0.0001887983,0.00003987781,0.0001014209,0.00008772591,0.000136596],"category_scores_gemma":[0.0005381252,0.0001537351,0.00002869129,0.0009753139,0.0007018149,0.0002174026,0.00005845019,0.0002913933,0.000007969168],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000129812,"about_ca_system_score_gemma":0.0001838654,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002180748,"about_ca_topic_score_gemma":0.001089178,"domain_scores_codex":[0.997932,0.0002113596,0.0004648392,0.0004191946,0.0005387287,0.0004339298],"domain_scores_gemma":[0.9987749,0.0003363653,0.00009910289,0.0002504378,0.0004118006,0.0001273841],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001404426,0.0009069348,0.9909211,0.0003173662,0.00003104392,0.00002780626,0.000416646,1.881388e-7,0.002182337,0.0005347713,0.0001587894,0.003098621],"study_design_scores_gemma":[0.008087039,0.00585682,0.9783995,0.0004916077,0.00001425385,7.003391e-7,0.00006913129,0.00002777445,0.00637924,0.0002712251,0.0002644708,0.0001383018],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981132,0.0004567984,0.00001036662,0.0002123523,0.00001834653,0.0007743127,0.00002808322,0.00002612506,0.0003604031],"genre_scores_gemma":[0.9957713,0.0005126407,0.000566596,0.00003973519,0.00002861132,0.00004472181,0.00008871865,0.00002316362,0.00292447],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01252163,"threshold_uncertainty_score":0.6269134,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05731739124099637,"score_gpt":0.3647397098987056,"score_spread":0.3074223186577092,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}