{"id":"W2802843859","doi":"10.1128/genomea.00242-18","title":"Near-Complete Genome Sequence of Pseudomonas palleroniana MAB3, a Beneficial 1-Aminocyclopropane-1-Carboxylate Deaminase-Producing Bacterium Able To Promote the Growth of Mushrooms and Plants","year":2018,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Biology; Whole genome sequencing; Bacteria; Genome; Amanita; Mushroom; Chromosome; Pseudomonas; Circular bacterial chromosome; Botany; Gene; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003426545,0.0001994893,0.0002779051,0.00002695534,0.0004267891,0.00007136325,0.0004458035,0.0000586367,0.0001700314],"category_scores_gemma":[0.00002749705,0.00008816303,0.00005282096,0.000280269,0.0002033375,0.0001504652,0.000243648,0.0001235857,0.00003917125],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004595001,"about_ca_system_score_gemma":0.00002226804,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003059074,"about_ca_topic_score_gemma":0.0006521096,"domain_scores_codex":[0.998533,0.00006335133,0.000403059,0.0003719582,0.0002273594,0.000401267],"domain_scores_gemma":[0.9992719,0.00003771238,0.0002300258,0.0001740429,0.0002017677,0.00008455647],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001103163,0.00007747635,0.001971232,0.00002173792,0.00004570745,0.000003156231,0.0008866646,0.000005271414,0.9944108,0.000005416414,0.00002153193,0.00244073],"study_design_scores_gemma":[0.0004695447,0.002501924,0.8812895,0.0001859795,0.00005488812,0.0001000762,0.0006911698,0.0001635805,0.03834738,0.0001721825,0.0754383,0.0005855206],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970833,0.0001008989,0.00000472711,0.0002302113,0.0001588326,0.0004355676,0.001617043,0.00001608153,0.0003533595],"genre_scores_gemma":[0.9989408,0.00008915644,0.0002327348,0.0001423678,0.0001357832,0.00001509038,0.000244916,0.000002640249,0.0001965444],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9560634,"threshold_uncertainty_score":0.4624425,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03534377666243156,"score_gpt":0.2334632616234233,"score_spread":0.1981194849609917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}