{"id":"W2802853477","doi":"10.1097/qad.0000000000001854","title":"Perinatally acquired HIV infection accelerates epigenetic aging in South African adolescents","year":2018,"lang":"en","type":"article","venue":"AIDS","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":94,"is_retracted":false,"has_abstract":true,"ca_institutions":"British Columbia Children's Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Mental Health; National Institute on Aging","keywords":"Epigenetics; Cohort; DNA methylation; Medicine; Biomarker; Cohort study; Biology; Internal medicine; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001733721,0.000130334,0.0001036144,0.00008869109,0.00007463794,0.00003786521,0.0001111793,0.0001110848,0.00002894037],"category_scores_gemma":[0.00005932356,0.0001352789,0.00004721463,0.0001754543,0.00007416468,0.000005328591,0.00009600682,0.00004561666,0.00003604538],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001961438,"about_ca_system_score_gemma":0.0000373544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004466482,"about_ca_topic_score_gemma":0.00007123434,"domain_scores_codex":[0.9990958,0.00006324311,0.0001862419,0.0003145805,0.0001001851,0.0002399675],"domain_scores_gemma":[0.9995416,0.000003806466,0.00006193735,0.000248885,0.00008415394,0.00005961339],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003475623,0.00004628646,0.4859952,0.0000168146,0.0000118626,0.000001417007,0.0003745903,0.00008487162,0.5054875,0.00001414258,0.00001443212,0.007918093],"study_design_scores_gemma":[0.0004938542,0.000404443,0.4230309,0.00003401722,0.00000857161,9.028997e-7,0.00007127839,0.0001971798,0.5716892,0.0001095785,0.003752881,0.0002072331],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9952427,0.0004618566,0.002972776,0.00002484648,0.00017675,0.0001217209,0.000004881923,0.00001443344,0.0009800713],"genre_scores_gemma":[0.9986567,0.000100365,0.0004921018,0.00006418608,0.0003550374,0.00001340363,0.00004678063,0.00002262305,0.0002487621],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06620166,"threshold_uncertainty_score":0.5516512,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01359531039135559,"score_gpt":0.2623051396571987,"score_spread":0.2487098292658431,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}