{"id":"W2803131253","doi":"10.1016/j.pvr.2018.05.003","title":"HPV E6 oncoproteins and nucleic acids in neck lymph node fine needle aspirates and oral samples from patients with oropharyngeal squamous cell carcinoma","year":2018,"lang":"en","type":"article","venue":"Papillomavirus Research","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Juravinski Hospital; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"DNA Genotek","keywords":"Medicine; Lymph node; Lymph; Pathology; Cancer research; Internal medicine; Oncology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003743472,0.0002732704,0.0006021718,0.0002831205,0.0003468982,0.00006909054,0.000140474,0.0001309476,0.0003156736],"category_scores_gemma":[0.0001700386,0.0002033467,0.00003028965,0.0005212014,0.0007358445,0.000150215,0.0003110019,0.0003867913,0.00006929036],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001856353,"about_ca_system_score_gemma":0.0002279948,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01501461,"about_ca_topic_score_gemma":0.002847457,"domain_scores_codex":[0.9973828,0.0001688391,0.0003043522,0.0006400107,0.0007217783,0.0007822154],"domain_scores_gemma":[0.9986125,0.000263494,0.00004741644,0.0003758086,0.0003579684,0.0003427768],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001803281,0.0002821089,0.9663493,0.000157022,0.00002346113,0.00009280717,0.002145192,1.386968e-7,0.006388173,0.000007099434,0.0005424178,0.02220898],"study_design_scores_gemma":[0.008616531,0.003312718,0.9744922,0.00011643,0.00002648933,0.000003642497,0.0004353051,0.00007321305,0.01078206,0.00007250423,0.001837944,0.0002309452],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9923549,0.003475623,0.000001487828,0.0003455418,0.00005267703,0.0007003077,0.0001095701,0.00003615622,0.002923791],"genre_scores_gemma":[0.9980861,0.0001806319,0.0008043484,0.0002058286,0.0002431182,0.00008108062,0.00004155876,0.00005493856,0.0003024236],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02197804,"threshold_uncertainty_score":0.9915445,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05250649816143727,"score_gpt":0.3257224957788406,"score_spread":0.2732159976174033,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}