{"id":"W2803378712","doi":"10.1111/1755-0998.12901","title":"Wild GWAS—association mapping in natural populations","year":2018,"lang":"en","type":"article","venue":"Molecular Ecology Resources","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":146,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Genome-wide association study; Association mapping; Epistasis; Genotyping; Genetic association; Evolutionary biology; Quantitative trait locus; Genetics; Identification (biology); Population; Trait; Computational biology; Genotype; Single-nucleotide polymorphism; Ecology; Gene; Demography","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001874149,0.000131568,0.0001406081,0.00008722796,0.0001079215,0.00001684876,0.0001919665,0.0002366445,0.0000426464],"category_scores_gemma":[0.0001801155,0.000140036,0.00006367551,0.0001460936,0.00009886423,0.000002686228,0.00009908979,0.0001298845,0.00003608943],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003733889,"about_ca_system_score_gemma":0.00003090729,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002284946,"about_ca_topic_score_gemma":0.0004280135,"domain_scores_codex":[0.998897,0.0001374804,0.0002138235,0.0003271917,0.0001037409,0.0003207859],"domain_scores_gemma":[0.9995511,0.00001226677,0.00009215219,0.0002303676,0.00006697582,0.0000471271],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006205594,0.0001410953,0.8234342,0.00001312404,0.00009371901,0.000006413924,0.0008940711,0.0007237444,0.1650714,0.00381286,0.003456345,0.002290898],"study_design_scores_gemma":[0.0005321782,0.0002355371,0.9540885,0.000008710941,0.00001473942,0.00001017746,0.0001095909,0.00006083815,0.007579803,0.00222662,0.03491788,0.0002154249],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939143,0.0004957021,0.00120686,0.0004238147,0.0004034633,0.0001609744,0.000003951158,0.0000168879,0.00337404],"genre_scores_gemma":[0.9883798,0.000004360952,0.008848503,0.0008109044,0.0002778757,0.0000228873,0.00004265147,0.0000176833,0.001595268],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1574916,"threshold_uncertainty_score":0.5710503,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00875951054864668,"score_gpt":0.2368335531510451,"score_spread":0.2280740426023984,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}