{"id":"W2803559577","doi":"10.1002/path.5101","title":"Functional molecules in mesothelial‐to‐mesenchymal transition revealed by transcriptome analyses","year":2018,"lang":"en","type":"article","venue":"The Journal of Pathology","topic":"Parathyroid Disorders and Treatments","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Kidney Research UK; Medical Research Council Canada; University of Manchester; Wellcome Trust; McMaster University","keywords":"Mesothelial Cell; Immunostaining; Epithelial–mesenchymal transition; Peritoneal dialysis; Cell biology; Fibrosis; Transcriptome; Cancer research; Pathology; Peritoneum; Transforming growth factor; Biology; Downregulation and upregulation; Medicine; Internal medicine; Immunohistochemistry; Gene expression; Gene; Biochemistry","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003695087,0.00009742167,0.0002770173,0.000181821,0.00004806736,0.000003703867,0.00006974603,0.0000601921,0.0001052529],"category_scores_gemma":[0.00003766431,0.0000585174,0.00009600052,0.0002062935,0.0001099725,0.00004794425,0.000004658344,0.0001499361,0.00004303314],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003444834,"about_ca_system_score_gemma":0.00005497471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001939844,"about_ca_topic_score_gemma":0.00002324803,"domain_scores_codex":[0.9990788,0.0001838312,0.0003146511,0.00008515537,0.0001771251,0.0001604329],"domain_scores_gemma":[0.9995642,0.00003988401,0.00009901849,0.0001071465,0.0001116611,0.00007812316],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002877256,0.0005522381,0.004140447,0.000004771588,0.0001523558,0.0005726945,0.003138243,0.00008509453,0.9684266,0.0000367623,0.01932826,0.0006853109],"study_design_scores_gemma":[0.02799542,0.01516806,0.8490976,0.0001178136,0.001900562,0.01736066,0.003001006,0.0003715577,0.0755403,0.00408603,0.004879818,0.0004811382],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9839654,0.002352087,0.008652383,0.004178687,0.0001364696,0.0001156323,0.00001206754,0.000004800475,0.0005824849],"genre_scores_gemma":[0.9976224,0.0001526606,0.0004778286,0.001377663,0.0001475215,0.000002492739,0.000005441078,0.000008918374,0.0002050299],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8928863,"threshold_uncertainty_score":0.238627,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03905122263637387,"score_gpt":0.3417503986219551,"score_spread":0.3026991759855813,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}