{"id":"W2804223529","doi":"10.1186/s12885-020-07078-8","title":"DNA methylation signatures of Prostate Cancer in peripheral T-cells","year":2020,"lang":"en","type":"article","venue":"BMC Cancer","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill Genome Centre; McGill University Health Centre; University of Calgary; McGill University","funders":"Canadian Institutes of Health Research","keywords":"DNA methylation; Prostate cancer; Methylation; Immune system; Cancer; Biology; Medicine; Cancer research; Oncology; Internal medicine; Immunology; DNA; Gene; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001133442,0.0001226394,0.0001816244,0.0003735441,0.0001417609,0.0002518441,0.0001103946,0.0001603627,0.001731435],"category_scores_gemma":[0.0002568933,0.00008938896,0.0001108638,0.0003094079,0.0001406093,0.00006882283,0.0001466874,0.0001974079,0.0002368427],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001080566,"about_ca_system_score_gemma":0.0001191111,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007357737,"about_ca_topic_score_gemma":0.0008919639,"domain_scores_codex":[0.9999135,0.00001380739,0.000004140365,0.00003400412,0.0000193157,0.00001529718],"domain_scores_gemma":[0.9998682,0.00002508058,0.00004004664,0.00001032874,0.00002769055,0.00002869145],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002101483,0.00008995384,0.2813852,0.0002359403,0.000136608,0.0001536711,0.0003008488,0.0004854671,0.6879804,0.0001221755,0.0003424849,0.02666569],"study_design_scores_gemma":[0.00003720362,0.0007560803,0.9327906,0.00001376236,0.0001302418,0.00138941,0.0001462194,0.001348194,0.06185692,0.0002439629,0.001276487,0.0000109523],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979442,0.0006632378,0.000671616,0.00001887119,0.000002844621,0.000006366126,0.0002890539,0.00002645655,0.0003774041],"genre_scores_gemma":[0.9989685,0.0001278696,0.0003672111,0.00001844159,0.000004484483,0.000007447695,0.000271426,0.000003645876,0.0002309462],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001731435,"threshold_uncertainty_score":0.005792201,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01670412596763941,"score_gpt":0.2846254570367809,"score_spread":0.2679213310691415,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}