{"id":"W2804413464","doi":"10.1139/gen-2017-0201","title":"Genetic identity in genebanks: application of the SolCAP 12K SNP array in fingerprinting and diversity analysis in the global in trust potato collection","year":2018,"lang":"en","type":"article","venue":"Genome","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":50,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Genetic diversity; Phylogenetic tree; Population; Genetics; Genetic distance; Genetic variation; Ploidy; Evolutionary biology; SNP; Genotype; Single-nucleotide polymorphism; Gene","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003351694,0.00004743351,0.00009930773,0.00002201867,0.0001039696,0.00001599158,0.0001876582,0.00004036228,0.000006733396],"category_scores_gemma":[0.00001225991,0.00001797598,0.00003005503,0.001715473,0.00004885102,0.00003843166,0.00008125012,0.00004865607,8.940067e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005555555,"about_ca_system_score_gemma":0.000003932289,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005487298,"about_ca_topic_score_gemma":0.302373,"domain_scores_codex":[0.9994017,0.00008808015,0.0001425963,0.0001554138,0.00009814352,0.0001140589],"domain_scores_gemma":[0.9998412,0.00002644716,0.00006341736,0.00004547964,0.00001308358,0.00001038628],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00000854437,0.00002394007,0.8821097,0.000002264426,0.000003011022,8.90512e-7,0.0002715885,0.00007498016,0.1168172,0.00001996147,3.037318e-7,0.0006676141],"study_design_scores_gemma":[0.00006224366,0.00001178726,0.9987546,0.000004299178,0.000007989815,7.9287e-7,0.0003777361,0.000270165,0.00009108031,0.0003483571,0.00003119224,0.00003978354],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993401,0.0001351218,0.00002054586,0.0001127211,0.00001395101,0.000148252,0.00001935375,0.000002044622,0.0002079807],"genre_scores_gemma":[0.9998053,0.00009505123,0.00003528197,0.00002850278,0.00002117671,0.000005105346,0.000002876871,1.518493e-7,0.000006493115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2968857,"threshold_uncertainty_score":0.829519,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01138313809486964,"score_gpt":0.2109798174222031,"score_spread":0.1995966793273335,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}